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Table of Contents

 
 
UNITED STATES SECURITIES AND EXCHANGE COMMISSION
Washington, D.C. 20549
FORM 10-Q
     
þ   QUARTERLY REPORT PURSUANT TO SECTION 13 OR 15(d) OF THE SECURITIES EXCHANGE ACT OF 1934
For the quarterly period ended September 30, 2009
OR
     
o   TRANSITION REPORT PURSUANT TO SECTION 13 OR 15(d) OF THE SECURITIES EXCHANGE ACT OF 1934
For the transition period from                      to                     
Commission File Number: 001-32721
WESTERN REFINING, INC.
(Exact name of registrant as specified in its charter)
     
Delaware   20-3472415
(State or other jurisdiction of   (I.R.S. Employer
incorporation or organization)   Identification No.)
     
123 W. Mills Ave., Suite 200   79901
El Paso, Texas   (Zip Code)
(Address of principal executive    
offices)    
Registrant’s telephone number, including area code: (915) 534-1400
Indicate by check mark whether the registrant (1) has filed all reports required to be filed by Section 13 or 15(d) of the Securities Exchange Act of 1934 during the preceding 12 months (or for such shorter period that the registrant was required to file such reports), and (2) has been subject to such filing requirements for the past 90 days. Yes þ No o
Indicate by check mark whether the registrant has submitted electronically and posted on its corporate Web site, if any, every Interactive Data File required to be submitted and posted pursuant to Rule 405 of Regulation S-T (§232.405 of this chapter) during the preceding 12 months (or for such shorter period that the registrant was required to submit and post such files). Yes o No o
Indicate by check mark whether the registrant is a large accelerated filer, an accelerated filer, a non-accelerated filer, or a smaller reporting company. See the definitions of “large accelerated filer,” “accelerated filer” and “smaller reporting company” in Rule 12b-2 of the Exchange Act.
             
Large accelerated filer o   Accelerated filer þ   Non-accelerated filer o   Smaller reporting company o
        (Do not check if a smaller reporting company)    
Indicate by check mark whether the registrant is a shell company (as defined in Rule 12b-2 of the Exchange Act). Yes o No þ
As of November 6, 2009, there were 88,748,610 shares outstanding, par value $0.01, of the registrant’s common stock.
 
 


 

WESTERN REFINING, INC. AND SUBSIDIARIES
INDEX
         
    Page No.
       
 
       
       
 
       
    1  
 
       
    2  
 
       
    3  
 
       
    4  
 
       
    5  
 
       
    30  
 
       
    55  
 
       
    56  
 
       
       
 
       
    57  
 
       
    57  
 
       
    58  
 
       
    59  
 
       
    60  
 EX-31.1
 EX-31.2
 EX-32.1
 EX-32.2

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Forward-Looking Statements
     As provided by the safe harbor provisions of the Private Securities Litigation Reform Act of 1995, certain statements included throughout this Quarterly Report on Form 10-Q, and in particular under the sections entitled Part I. — Item 2. “Management’s Discussion and Analysis of Financial Condition and Results of Operations” and Part II. — Item 1. “Legal Proceedings” relating to matters that are not historical fact are forward-looking statements that represent management’s beliefs and assumptions based on currently available information. These forward-looking statements relate to matters such as our industry, business strategy, goals and expectations concerning our market position, future operations, margins, profitability, deferred taxes, capital expenditures, liquidity and capital resources, our working capital requirements, our ability to improve our capital structure through asset sales and/or through certain financings, and other financial and operating information. Forward-looking statements also include those regarding the timing of completion of certain operational improvements we are making at our refineries, future operational or refinery efficiencies and cost savings, future refining capacity, timing of future maintenance turnarounds, the amount or sufficiency of future cash flows and earnings growth, future expenditures and future contributions related to pension and postretirement obligations, our ability to manage our inventory price exposure through commodity derivative instruments, the impact on our business of existing and future state and federal regulatory requirements, environmental loss contingency accruals, projected remediation costs or requirements and the expected outcomes of legal proceedings in which we are involved. We have used the words “anticipate,” “assume,” “believe,” “budget,” “continue,” “could,” “estimate,” “expect,” “intend,” “may,” “plan,” “potential,” “predict,” “project,” “will,” “future,” and similar terms and phrases to identify forward-looking statements in this report.
     Forward-looking statements reflect our current expectations regarding future events, results, or outcomes. These expectations may or may not be realized. Some of these expectations may be based upon assumptions or judgments that prove to be incorrect. In addition, our business and operations involve numerous risks and uncertainties, many of which are beyond our control, which could result in our expectations not being realized or otherwise materially affect our financial condition, results of operations, and cash flows.
     Actual events, results, and outcomes may differ materially from our expectations due to a variety of factors. Although it is not possible to identify all of these factors, they include, among others, the following:
    our ability to realize the synergies from our acquisition of Giant Industries, Inc., or Giant;
 
    higher than expected costs or expenses arising from the Giant acquisition;
 
    adverse changes in our credit ratings;
 
    conditions in the capital markets;
 
    our ability to raise additional funds for our working capital needs in the public or private debt or equity markets;
 
    adverse changes in our crude oil, finished products and other suppliers’ view as to our creditworthiness;
 
    worsening of the current economic crisis in the United States and instability and volatility in the financial markets;
 
    changes in the underlying demand for our refined products;
 
    availability, costs, and price volatility of crude oil, other refinery feedstocks, and refined products;
 
    an adverse result in the lawsuit brought against our subsidiary, Western Refining Yorktown, Inc., by Statoil Marketing and Trading (USA), Inc. regarding our declaration of force majeure under our crude oil supply agreement with them;
 
    changes in crack spreads;

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    changes in the sweet/sour spread;
 
    crude oil pricing differentials;
 
    changes in the spread between West Texas Intermediate crude oil and Dated Brent crude oil;
 
    construction of new, or expansion of existing, product pipelines in the areas that we serve;
 
    actions of customers and competitors;
 
    changes in fuel and utility costs incurred by our refineries;
 
    disruptions due to equipment interruption and pipeline disruptions, at our or third-party facilities;
 
    execution of planned capital projects, cost overruns relating to those projects and failure to realize the expected benefits from those projects;
 
    effects of, and costs relating to, compliance with current and future local, state, and federal environmental, economic, safety, tax and other laws, policies and regulations and enforcement initiatives;
 
    rulings, judgments or settlements in litigation or other legal or regulatory matters, including unexpected environmental remediation costs, in excess of any reserves or insurance coverage;
 
    the price, availability and acceptance of alternative fuels and alternative-fuel vehicles;
 
    operating hazards, natural disasters, casualty losses, acts of terrorism and other matters beyond our control; and
 
    other factors discussed in more detail under Part I. — Item 1A. “Risk Factors” in our Annual Report on Form 10-K for the year ended December 31, 2008, or 2008 10-K, which are incorporated herein by this reference, and in Part II. — Item 1. “Legal Proceedings” and Part II. — Item 1A. “Risk Factors” in our Quarterly Report on Form 10-Q for the quarter ended June 30, 2009, and in Part II. — Item 1. “Legal Proceedings” and Part II. — Item 1A. “Risk Factors” of this Quarterly Report on Form 10-Q.
     Any one of these factors or a combination of these factors could materially affect our results of operations and could influence whether any forward-looking statements ultimately prove to be accurate. You are urged to consider these factors carefully in evaluating any forward-looking statements and are cautioned not to place undue reliance on these forward-looking statements.
     Although we believe that our plans, intentions and expectations reflected in or suggested by the forward-looking statements we make in this report are reasonable, we can provide no assurance that such plans, intentions or expectations will be achieved. These statements are based on assumptions made by us based on our experience and perception of historical trends, current conditions, expected future developments and other factors that we believe are appropriate in the circumstances. Such statements are subject to a number of risks and uncertainties, many of which are beyond our control. The forward-looking statements included herein are made only as of the date of this report, and we are not required to update any information to reflect events or circumstances that may occur after the date of this report, except as required by applicable law.

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Part I
Financial Information
Item 1.   Financial Statements
WESTERN REFINING, INC. AND SUBSIDIARIES
CONDENSED CONSOLIDATED BALANCE SHEETS
(Unaudited)
(In thousands, except share data)
                 
    September 30,     December 31,  
    2009     2008  
ASSETS
               
 
               
Current assets:
               
Cash and cash equivalents
  $ 65,039     $ 79,817  
Accounts receivable, principally trade, net of a reserve for doubtful accounts of $3,866 and $2,516, respectively
    328,358       215,275  
Inventories
    451,244       425,536  
Prepaid expenses
    92,997       53,497  
Other current assets
    37,296       41,122  
 
           
Total current assets
    974,934       815,247  
Property, plant and equipment, net
    1,824,097       1,851,048  
Goodwill
          299,552  
Other assets, net of amortization
    119,437       110,945  
 
           
Total assets
  $ 2,918,468     $ 3,076,792  
 
           
 
               
LIABILITIES AND STOCKHOLDERS’ EQUITY
               
 
               
Current liabilities:
               
Accounts payable
  $ 447,665     $ 321,701  
Accrued liabilities
    128,670       121,961  
Current deferred income tax liability, net
    69,433       44,064  
Current portion of long-term debt
    13,000       13,000  
 
           
Total current liabilities
    658,768       500,726  
 
           
Long-term liabilities:
               
Long-term debt, net of current portion
    1,054,025       1,327,500  
Deferred income tax liability, net
    368,522       350,525  
Postretirement and other liabilities
    53,691       86,552  
 
           
Total long-term liabilities
    1,476,238       1,764,577  
 
           
Commitments and contingencies (Note 19)
               
Stockholders’ equity:
               
Common stock, par value $0.01, 240,000,000 shares authorized; 88,679,790 and 68,426,994 shares issued, respectively
    887       684  
Preferred stock, par value $0.01, 10,000,000 shares authorized; no shares issued and outstanding
           
Additional paid-in capital
    582,378       373,118  
Retained earnings
    224,366       477,537  
Accumulated other comprehensive loss, net of tax
    (2,726 )     (19,006 )
Treasury stock, 698,006 and 646,903 shares, respectively, at cost
    (21,443 )     (20,844 )
 
           
Total stockholders’ equity
    783,462       811,489  
 
           
Total liabilities and stockholders’ equity
  $ 2,918,468     $ 3,076,792  
 
           
The accompanying notes are an integral part of these condensed consolidated financial statements.

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WESTERN REFINING, INC. AND SUBSIDIARIES
CONDENSED CONSOLIDATED STATEMENTS OF OPERATIONS
(Unaudited)
(In thousands, except per share data)
                                 
    Three Months Ended     Nine Months Ended  
    September 30,     September 30,  
    2009     2008     2009     2008  
Net sales
  $ 1,896,273     $ 3,165,308     $ 4,848,016     $ 9,068,842  
Operating costs and expenses:
                               
Cost of products sold (exclusive of depreciation and amortization)
    1,698,673       2,790,475       4,102,359       8,297,385  
Direct operating expenses (exclusive of depreciation and amortization)
    116,717       133,206       374,195       399,503  
Selling, general and administrative expenses
    23,725       32,449       85,903       90,000  
Goodwill impairment loss
                299,552        
Maintenance turnaround expense
    1,031       528       4,353       1,738  
Depreciation and amortization
    34,725       29,218       109,382       82,567  
 
                       
Total operating costs and expenses
    1,874,871       2,985,876       4,975,744       8,871,193  
 
                       
Operating income (loss)
    21,402       179,432       (127,728 )     197,649  
Other income (expense):
                               
Interest income
    17       478       197       1,430  
Interest expense
    (33,024 )     (31,153 )     (88,047 )     (69,838 )
Amortization of loan fees
    (1,795 )     (1,553 )     (4,832 )     (3,234 )
Write-off of unamortized loan fees
                (9,047 )     (10,890 )
Gain (loss) from derivative activities
    (726 )     6,022       (13,251 )     (7,826 )
Other income (expense)
    (39 )     422       4,594       1,356  
 
                       
Income (loss) before income taxes
    (14,165 )     153,648       (238,114 )     108,647  
Provision for income taxes
    9,383       (44,411 )     (15,057 )     (31,621 )
 
                       
Net income (loss)
  $ (4,782 )   $ 109,237     $ (253,171 )   $ 77,026  
 
                       
 
                               
Net earnings (loss) per share:
                               
Basic
  $ (0.05 )   $ 1.60     $ (3.29 )   $ 1.13  
Diluted
  $ (0.05 )   $ 1.60     $ (3.29 )   $ 1.13  
 
                               
Weighted average common shares outstanding:
                               
Basic
    87,973       67,760       76,191       67,696  
Diluted
    87,973       67,760       76,191       67,752  
 
                               
Cash dividends declared per share
  $     $     $     $ 0.06  
The accompanying notes are an integral part of these condensed consolidated financial statements.

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WESTERN REFINING, INC. AND SUBSIDIARIES
CONDENSED CONSOLIDATED STATEMENTS OF CASH FLOWS
(Unaudited)
(In thousands)
                 
    Nine Months Ended  
    September 30,  
    2009     2008  
Cash flows from operating activities:
               
Net income (loss)
  $ (253,171 )   $ 77,026  
Adjustments to reconcile net income (loss) to net cash provided by operating activities:
               
Goodwill impairment loss
    299,552        
Depreciation and amortization
    109,382       82,567  
Amortization of loan fees
    4,832       3,234  
Amortization of original issuance discount
    4,202        
Write-off of unamortized loan fees
    9,047       10,890  
Stock-based compensation expense
    3,493       6,381  
Deferred income taxes
    11,193       10,020  
Loss from the disposal of assets
    348       640  
Changes in operating assets and liabilities:
               
Accounts receivable
    (113,083 )     (50,651 )
Inventories
    (25,707 )     121,816  
Prepaid expenses
    (39,500 )     (75,647 )
Other assets
    159       53,699  
Accounts payable
    138,908       (82,377 )
Accrued liabilities
    5,938       19,204  
Postretirement and other long-term liabilities
    (7,040 )     (6,692 )
 
           
Net cash provided by operating activities
    148,553       170,110  
 
           
 
               
Cash flows from investing activities:
               
Capital expenditures
    (93,762 )     (156,160 )
Proceeds from the sale of assets
    395       458  
 
           
Net cash used in investing activities
    (93,367 )     (155,702 )
 
           
 
               
Cash flows from financing activities:
               
Additions to long-term debt
    747,183        
Payments on long-term debt
    (922,443 )     (9,750 )
Common stock offering
    170,442        
Revolving credit facility, net
    (60,000 )     (90,000 )
Deferred loan fees
    (4,547 )     (22,357 )
Dividends paid
          (8,182 )
Repurchases of common stock
  (599 )   (1,189 )
Net cash used in financing activities
    (69,964 )     (131,478 )
 
           
Net decrease in cash and cash equivalents
    (14,778 )     (117,070 )
Cash and cash equivalents at beginning of period
    79,817       289,565  
 
           
Cash and cash equivalents at end of period
  $ 65,039     $ 172,495  
 
           
 
               
Supplemental Disclosures of Cash Flow Information
               
Cash paid (refunded) for:
               
Income taxes, net
  $ (5,071 )   $ (55,039 )
Interest
    88,638       61,377  
Non-cash investing and financing activities:
               
Reduction of long-term debt proceeds for original issuance discounts and deferred financing costs
  $ 68,267     $  
Equity component of convertible notes, net of deferred taxes of $22.6 million
    38,252        
Pension plan termination adjustment, net of tax
    16,144        
Accrued capital expenditures
    776        
The accompanying notes are an integral part of these condensed consolidated financial statements.

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WESTERN REFINING, INC. AND SUBSIDIARIES
CONDENSED CONSOLIDATED STATEMENTS OF COMPREHENSIVE INCOME (LOSS)
(Unaudited)
(In thousands)
                                 
    Three Months Ended     Nine Months Ended  
    September 30,     September 30,  
    2009     2008     2009     2008  
Net income (loss)
  $ (4,782 )   $ 109,237     $ (253,171 )   $ 77,026  
 
                               
Other comprehensive income (loss) items:
                               
Defined benefit plans:
                               
Reclassification of losses to income, net of tax expense of $1, $76, $81 and $23, respectively
    1       128       136       588  
Pension plan termination adjustment, net of tax expense of $9,545
                16,144        
Change in fair value of interest rate swap, net of tax benefit of $273
          (460 )            
 
                       
Other comprehensive income (loss), net of tax
    1       (332 )     16,280       588  
 
                       
 
                               
Comprehensive income (loss)
  $ (4,781 )   $ 108,905     $ (236,891 )   $ 77,614  
 
                       
The accompanying notes are an integral part of these condensed consolidated financial statements.

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WESTERN REFINING, INC. AND SUBSIDIARIES
NOTES TO CONDENSED CONSOLIDATED FINANCIAL STATEMENTS
(UNAUDITED)
1. Organization and Basis of Presentation
     The “Company” or “Western” may be used to refer to Western Refining, Inc. and, unless the context otherwise requires, its subsidiaries. Any references to the “Company” as of a date prior to September 16, 2005 (the date of Western Refining, Inc.’s formation) are to Western Refining Company, L.P. (“Western Refining LP”). On May 31, 2007, the Company completed the acquisition of Giant Industries, Inc. (“Giant”). Any references to the “Company” prior to this date exclude the operations of Giant.
     The Company is an independent crude oil refiner and marketer of refined products and also operates service stations and convenience stores. The Company owns and operates four refineries with a total crude oil throughput capacity of approximately 238,000 barrels per day (“bpd”). In addition to the Company’s 128,000 bpd refinery in El Paso, Texas, the Company also owns and operates a 70,000 bpd refinery on the East Coast of the United States near Yorktown, Virginia and two refineries in the Four Corners region of Northern New Mexico with a combined throughput capacity of 40,000 bpd. The Company’s primary operating areas encompass West Texas, Arizona, New Mexico, Utah, Colorado, and the Mid-Atlantic region. In addition to the refineries, the Company also owns and operates stand-alone refined products terminals in Flagstaff, Arizona and Albuquerque, New Mexico, as well as asphalt terminals in Phoenix and Tucson, Arizona, Albuquerque and El Paso. As of September 30, 2009, the Company also owned and operated 152 retail service stations and convenience stores in Arizona, Colorado and New Mexico; a fleet of crude oil and refined product truck transports; and a wholesale petroleum products distributor that operates in Arizona, California, Colorado, Nevada, New Mexico, Texas, and Utah.
     The Company’s operations include three business segments: the refining group, the retail group, and the wholesale group. See Note 3, “Segment Information” for a further discussion of the Company’s business segments.
     Demand for gasoline is generally higher during the summer months than during the winter months. In addition, higher volumes of ethanol are blended to the gasoline produced in the Southwest region during the winter months, thereby increasing the supply of gasoline. This combination of decreased demand and increased supply during the winter months can lower gasoline prices. As a result, the Company’s operating results for the first and fourth calendar quarters are generally lower than those for the second and third calendar quarters of each year. The effects of seasonal demand for gasoline are partially offset by increased demand during the winter months for diesel fuel in the Southwest and heating oil in the Northeast. Throughout 2009, however, refining margins have been extremely volatile and the Company’s results of operations do not reflect these seasonal trends.
     The accompanying unaudited condensed consolidated financial statements have been prepared in accordance with U.S. generally accepted accounting principles (“GAAP”) for interim financial information and with the instructions to Form 10-Q and Article 10 of Regulation S-X. Accordingly, they do not include all of the information and footnotes required by GAAP for complete financial statements. In the opinion of management, all adjustments (consisting of normal recurring accruals) considered necessary for a fair presentation have been included. Effective April 1, 2009, the Company adopted Financial Accounting Standards Board Codification (“FASC”) 855, Subsequent Events, as it relates to general standards of accounting for and disclosure of events that occur after the balance sheet date but before the financial statements are issued. The Company evaluated subsequent events for recording and disclosure through the filing of this Form 10-Q on November 9, 2009. See Note 20. “Subsequent Events.” Operating results for the three and nine months ended September 30, 2009, are not necessarily indicative of the results that may be expected for the year ending December 31, 2009, or for any other period.
     The Condensed Consolidated Balance Sheet at December 31, 2008, has been derived from the audited financial statements of the Company at that date but does not include all of the information and footnotes required by GAAP for complete financial statements. The accompanying condensed consolidated financial statements should be read in conjunction with the consolidated financial statements and notes thereto included in the Company’s Annual Report on Form 10-K for the year ended December 31, 2008 (“2008 Form 10-K”).
     The condensed consolidated financial statements include the accounts of Western Refining, Inc. and its wholly-owned subsidiaries. All significant intercompany accounts and transactions have been eliminated.

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WESTERN REFINING, INC. AND SUBSIDIARIES
NOTES TO CONDENSED CONSOLIDATED FINANCIAL STATEMENTS
(UNAUDITED)
2. Recent Accounting Pronouncements
     For business combinations for which the acquisition date occurs in on or after the first annual reporting period beginning on or after December 15, 2008, Financial Accounting Standards Codification (“FASC”) 805, Business Combinations (“FASC 805”), provides that contingent assets acquired or liabilities assumed in a business combination be recorded at fair value if the acquisition date fair value can be determined during the measurement period. If not, such items would be recognized at the acquisition date if they meet the recognition requirements of FASC 805. In periods after the acquisition date, an acquirer shall account for contingent assets and liabilities that were not recognized at the acquisition date in accordance with other applicable GAAP, as appropriate. Items not recognized as part of the acquisition but recognized subsequently would be reflected in that subsequent period’s income. These provisions of FASC 805 will have no immediate impact on the Company’s financial position or results of operations.
     For fiscal years ending after December 15, 2009, FASC 715, Compensation – Retirement Benefits (“FASC 715”), provides for a range of additional disclosures designed to give more specific information about pension plans, consisting of (a) how investment allocation decisions are made, including the factors that are pertinent to an understanding of investment policies and strategies, (b) the major categories of plan assets, (c) the inputs and valuation techniques used to measure the fair value of plan assets, (d) the effect of fair value measurements using significant unobservable inputs (Level 3) on changes in plan assets for the period, and (e) significant concentrations of risk within plan assets. These disclosure requirements are effective for the Company beginning January 1, 2010. The principal impact from this standard will be to require the Company to expand its disclosures regarding its defined benefit and postretirement plans.
3. Segment Information
     The Company is organized into three operating segments based on manufacturing and marketing criteria and the nature of their products and services, their production processes, and their types of customers. These segments are the refining group, the retail group, and the wholesale group. A description of each segment and its principal products follows:
     Refining Group. The Company’s refining group operates four refineries: one in El Paso, Texas (the El Paso refinery); two in the Four Corners region of Northern New Mexico, one near Gallup and one in Bloomfield (the Four Corners refineries); and one near Yorktown, Virginia (the Yorktown refinery). The refining group also operates a crude oil transportation and gathering pipeline system in New Mexico, an asphalt plant in El Paso, two stand-alone refined products distribution terminals and four asphalt distribution terminals. The four refineries make various grades of gasoline, diesel fuel, and other products from crude oil, other feedstocks, and blending components. The Company purchases crude oil, other feedstocks, and blending components from various suppliers. The Company also acquires refined products through exchange agreements and from various third-party suppliers. The Company sells these products through its own service stations, its own wholesale group, independent wholesalers and retailers, commercial accounts, and sales and exchanges with major oil companies.

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WESTERN REFINING, INC. AND SUBSIDIARIES
NOTES TO CONDENSED CONSOLIDATED FINANCIAL STATEMENTS
(UNAUDITED)
     Retail Group. The Company’s retail group operates service stations, which include convenience stores or kiosks. The service stations sell various grades of gasoline, diesel fuel, general merchandise, and beverage and food products to the general public. The Company’s refining and/or wholesale groups supply the gasoline and diesel fuel that the retail group sells. The Company purchases general merchandise and beverage and food products from various suppliers. At September 30, 2009, the Company’s retail group operated 152 service stations and convenience stores or kiosks located in Arizona, New Mexico and Colorado.
     Wholesale Group. The Company’s wholesale group includes several lubricant and bulk petroleum distribution plants, unmanned fleet fueling operations, a bulk lubricant terminal facility, and a fleet of refined product and lubricant delivery trucks. The wholesale group distributes commercial wholesale petroleum products primarily in Arizona, California, Colorado, Nevada, New Mexico, Texas and Utah. The Company’s wholesale group purchases petroleum fuels and lubricants from suppliers and from the refining group.
     Segment Accounting Principles. Operating income for each segment consists of net revenues less cost of products sold; direct operating expenses; selling, general and administrative expenses; maintenance turnaround expense; and depreciation and amortization. Cost of products sold reflects current costs adjusted, where appropriate, for last-in, first-out (“LIFO”) and lower of cost or market (“LCM”) inventory adjustments. Intersegment revenues are reported at prices that approximate market.
     Operations that are not included in any of the three segments mentioned above are included in the category “Other.” These operations consist primarily of corporate staff operations and other items not considered to be related to the normal business operations of the other segments. Other items of income and expense, including income taxes, are not allocated to operating segments.
     The total assets of each segment consist primarily of cash and cash equivalents; net property, plant and equipment; inventories; net accounts receivable; goodwill; and other assets directly associated with the individual segment’s operations. Included in the total assets of the corporate operations are cash and cash equivalents; various accounts receivable; net property, plant and equipment; and other long-term assets.
     During the second quarter of 2009, in performing its annual impairment analysis, the Company determined that the entire goodwill of $299.6 million in four of its six reporting units was impaired. See Note 9, “Goodwill and Other Intangible Assets.”
     Disclosures regarding the Company’s reportable segments with reconciliations to consolidated totals for the three and nine months ended September 30, 2009 and 2008, are presented below:
                                         
    For the Three Months Ended September 30, 2009  
    Refining     Retail     Wholesale              
    Group     Group     Group     Other     Consolidated  
                    (In thousands)                  
Net sales to external customers
  $ 1,316,021     $ 171,490     $ 408,762     $     $ 1,896,273  
Intersegment revenues (1)
    518,109       5,218       60,380              
Depreciation and amortization
    29,686       2,415       1,394       1,230       34,725  
Operating income (loss)
    22,176       6,752       3,680       (11,206 )     21,402  
Other income (expense), net
                                    (35,567 )
 
                                     
Loss before income taxes
                                  $ (14,165 )
 
                                     
 
                                       
Capital expenditures
  $ 21,535     $ 2,090     $ 1     $ 408     $ 24,034  
 
(1)   Intersegment revenues of $583.7 million have been eliminated in consolidation.

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NOTES TO CONDENSED CONSOLIDATED FINANCIAL STATEMENTS
(UNAUDITED)
                                         
    For the Nine Months Ended September 30, 2009  
    Refining     Retail     Wholesale              
    Group     Group     Group     Other     Consolidated  
                    (In thousands)                  
Net sales to external customers
  $ 3,379,808     $ 451,387     $ 1,016,821     $     $ 4,848,016  
Intersegment revenues (1)
    1,265,901       15,058       169,645              
Depreciation and amortization
    94,162       7,298       4,205       3,717       109,382  
Operating income (loss) before goodwill impairment loss
    196,589       12,457       6,755       (43,977 )     171,824  
Goodwill impairment loss
    (230,712 )     (27,610 )     (41,230 )           (299,552 )
Operating loss after goodwill impairment loss
    (34,123 )     (15,153 )     (34,475 )     (43,977 )     (127,728 )
Other income (expense), net
                                    (110,386 )
 
                                     
Loss before income taxes
                                  $ (238,114 )
 
                                     
 
                                       
Capital expenditures
  $ 89,573     $ 2,476     $ 583     $ 1,130     $ 93,762  
                                         
Total assets at September 30, 2009
  $ 2,530,605     $ 157,064     $ 155,617     $ 75,182     $ 2,918,468  
 
                             
 
(1)   Intersegment revenues of $1,450.6 million have been eliminated in consolidation.
                                         
    For the Three Months Ended September 30, 2008  
    Refining     Retail     Wholesale              
    Group     Group     Group     Other     Consolidated  
                    (In thousands)                  
Net sales to external customers
  $ 2,344,023     $ 232,395     $ 588,890     $     $ 3,165,308  
Intersegment revenues (1)
    745,699       13,556       113,865              
Depreciation and amortization
    24,330       2,172       1,310       1,406       29,218  
Operating income (loss)
    180,781       6,315       8,808       (16,472 )     179,432  
Other income (expense), net
                                    (25,784 )
 
                                     
Income before income taxes
                                  $ 153,648  
 
                                     
 
                                       
Capital expenditures
  $ 35,310     $ 1,659     $ 900     $ 1,499     $ 39,368  
 
(1)   Intersegment revenues of $873.1 million have been eliminated in consolidation.

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WESTERN REFINING, INC. AND SUBSIDIARIES
NOTES TO CONDENSED CONSOLIDATED FINANCIAL STATEMENTS
(UNAUDITED)
                                         
    For the Nine Months Ended September 30, 2008  
    Refining     Retail     Wholesale              
    Group     Group     Group     Other     Consolidated  
                    (In thousands)                  
Net sales to external customers
  $ 6,812,181     $ 637,639     $ 1,619,022     $     $ 9,068,842  
Intersegment revenues (1)
    2,092,536       37,166       273,154              
Depreciation and amortization
    69,913       6,182       4,074       2,398       82,567  
Operating income (loss)
    219,178       8,811       14,682       (45,022 )     197,649  
Other income (expense), net
                                    (89,002 )
 
                                     
Income before income taxes
                                  $ 108,647  
 
                                     
 
                                       
Capital expenditures
  $ 140,357     $ 6,534     $ 4,196     $ 5,073     $ 156,160  
 
                                       
Total assets, excluding goodwill, at September 30, 2008
  $ 2,654,024     $ 175,957     $ 220,552     $ 124,716     $ 3,175,249  
Goodwill
    248,343       27,610       23,599             299,552  
 
                             
Total assets at September 30, 2008
  $ 2,902,367     $ 203,567     $ 244,151     $ 124,716     $ 3,474,801  
 
                             
 
(1)   Intersegment revenues of $2,402.9 million have been eliminated in consolidation.
4. Fair Value Measurement
     On January 1, 2008, the Company adopted the provisions of FASC 820, Fair Value Measurements and Disclosures (“FASC 820”), for its financial assets and liabilities. FASC 820, among other things, requires enhanced disclosures about assets and liabilities measured at fair value. On January 1, 2009, the Company adopted the provisions of FASC 820 for its nonfinancial assets and liabilities. The adoption of these standards did not have a material effect on the Company’s financial condition or results of operations, and had no impact on methodologies used by the Company in measuring the fair value of its assets and liabilities.
     The Company utilizes the market approach to measure fair value for its financial assets and liabilities. The market approach uses prices and other relevant information generated by market transactions involving identical or comparable assets or liabilities.
     FASC 820 includes a fair value hierarchy that is intended to increase consistency and comparability in fair value measurements and related disclosures. The fair value hierarchy is based on inputs to valuation techniques that are used to measure fair value that are either observable or unobservable. Observable inputs reflect assumptions market participants would use in pricing an asset or liability based on market data obtained from independent sources while unobservable inputs reflect a reporting entity’s pricing based upon their own market assumptions. The fair value hierarchy consists of the following three levels:
         
 
  Level 1   Inputs are quoted prices (unadjusted) in active markets for identical assets or liabilities.
 
       
 
  Level 2   Inputs are quoted prices for similar assets or liabilities in an active market, quoted prices for identical or similar assets or liabilities in markets that are not active, inputs other than quoted prices that are observable and market-corroborated inputs, which are derived principally from or corroborated by observable market data.
 
       
 
  Level 3   Inputs are derived from valuation techniques in which one or more significant inputs or value drivers are unobservable and cannot be corroborated by market data or other entity-specific inputs.

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NOTES TO CONDENSED CONSOLIDATED FINANCIAL STATEMENTS
(UNAUDITED)
     For cash, trade receivables and accounts payable, the fair value approximated carrying value at September 30, 2009. The following table represents the Company’s assets measured at fair value on a recurring basis as of September 30, 2009, and the basis for that measurement:
                                 
            Fair Value Measurement at September 30, 2009 Using
            Quoted Prices        
            in Active   Significant    
            Markets for   Other   Significant
            Identical Assets   Observable   Unobservable
    Carrying Value at   or Liabilities   Inputs   Inputs
    September 30, 2009   (Level 1)   (Level 2)   (Level 3)
            (In thousands)        
Financial assets:
                               
Money market accounts
  $ 10,114     $ 10,114     $     $  
Financial liabilities:
                               
Derivative contracts
    2,710             2,710        
     The following is a reconciliation of the beginning and ending balances of the Company’s goodwill measured at fair value on a nonrecurring basis using unobservable inputs (Level 3):
         
    2009  
    (In thousands)  
Balance at December 31, 2008
  $ 299,552  
Transfers into Level 3
     
Loss in fair value recognized in income
    (299,552 )
 
     
 
       
Balance at September 30, 2009
  $  
 
     
5. Inventories
     Inventories consisted of the following:
                 
    September 30,     December 31,  
    2009     2008  
    (In thousands)  
Refined products (1)
  $ 179,061     $ 171,394  
Crude oil and other feedstocks/blendstocks
    248,082       286,809  
Lubricants
    12,643       17,081  
Convenience store merchandise
    11,458       11,257  
 
           
 
    451,244       486,541  
LCM reserve
          (61,005 )
 
           
Inventories
  $ 451,244     $ 425,536  
 
           
 
(1)   Includes $9.5 million and $8.3 million of inventory valued using the first-in, first-out (“FIFO”) valuation method at September 30, 2009 and December 31, 2008, respectively.
     The Company values its crude oil, other raw materials and asphalt inventories at the lower of cost or market under the LIFO valuation method. Other than refined products inventories held by the Company’s retail and wholesale groups, refined products inventories are valued under the LIFO valuation method. Lubricants are valued under the FIFO valuation method and convenience store merchandise is valued under the retail inventory method.

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NOTES TO CONDENSED CONSOLIDATED FINANCIAL STATEMENTS
(UNAUDITED)
     As of September 30, 2009 and December 31, 2008, refined products valued under the LIFO method and crude oil and other raw materials totaled 7.2 million barrels and 8.0 million barrels, respectively. At September 30, 2009, the excess of the current cost of the Company’s crude oil, refined product and other feedstock and blendstock inventories over LIFO cost was $91.4 million. At December 31, 2008, aggregated LIFO costs exceeded the current cost of the Company’s crude oil, refined product and other feedstock and blendstock inventories by $25.6 million, net of the LCM reserve of $61.0 million. The net effect of the change in the LCM reserve to value the Company’s Yorktown inventories to net realizable market values on the Company’s Condensed Consolidated Statements of Operations is summarized in the table below:
                 
    Three Months   Nine Months
    Ended   Ended
    September 30, 2009   September 30, 2009
    (In thousands, except per share amount)
Operating income
  $ 11,696     $ 61,005  
Net income
    3,977       45,754  
 
               
Earnings per diluted share
  $ 0.05     $ 0.60  
     During the nine months ended September 30, 2008, the Company recorded LIFO liquidations caused by permanent decreased levels in inventories that were consistent with the Company’s expectations of year-end inventory levels of certain refined products. The effect of these liquidations increased gross profit by $7.5 million, net income by $5.3 million and earnings per diluted share by $0.08 for the three months ended September 30, 2008. The effect of these liquidations increased gross profit by $57.5 million, net income by $40.8 million and earnings per diluted share by $0.60 for the nine months ended September 30, 2008. There were no LIFO liquidations during the three and nine months ended September 30, 2009.
     Average LIFO cost per barrel prior to LCM adjustments of the Company’s refined product and crude oil and other feedstock and blendstock inventories as of September 30, 2009 and December 31, 2008 is shown below:
                                                 
    September 30, 2009     December 31, 2008  
            (In thousands, except cost per barrel)        
                    LIFO                     LIFO  
            LIFO     Cost Per             LIFO     Cost Per  
    Barrels     Cost     Barrel     Barrels     Cost     Barrel  
Refined products
    2,693     $ 169,519     $ 62.95       2,609     $ 163,092     $ 62.51  
Crude oil and other feedstocks/blendstocks
    4,531       248,082       54.75       5,369       286,809       53.42  
 
                                       
 
    7,224     $ 417,601       57.81       7,978     $ 449,901       56.39  
 
                                       
6. Prepaid Expenses
     Prepaid expenses consisted of the following:
                 
    September 30,     December 31,  
    2009     2008  
    (In thousands)  
Prepaid crude oil and other raw materials
  $ 71,733     $ 27,074  
Prepaid insurance and other
    21,264       26,423  
 
           
Prepaid expenses
  $ 92,997     $ 53,497  
 
           

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NOTES TO CONDENSED CONSOLIDATED FINANCIAL STATEMENTS
(UNAUDITED)
7. Other Current Assets
     Other current assets consisted of the following:
                 
    September 30,     December 31,  
    2009     2008  
    (In thousands)  
Materials and chemicals inventories
  $ 33,131     $ 31,671  
Income taxes (prepaid)
          7,021  
Derivative activities receivable
    2,774       610  
Spare parts inventories
    811       946  
Other
    580       874  
 
           
Other current assets
  $ 37,296     $ 41,122  
 
           
8. Property, Plant and Equipment
     Property, plant and equipment were as follows:
                 
    September 30,     December 31,  
    2009     2008  
    (In thousands)  
Refinery facilities and equipment
  $ 1,745,553     $ 1,530,424  
Pipelines, terminals and related equipment
    93,437       93,130  
Retail and wholesale facilities and related equipment
    182,015       179,376  
Other
    19,642       20,304  
Construction in progress
    74,936       223,467  
 
           
 
    2,115,583       2,046,701  
Accumulated depreciation
    (291,486 )     (195,653 )
 
           
Property, plant and equipment, net
  $ 1,824,097     $ 1,851,048  
 
           
     The Company owns a pipeline that runs from Southeast New Mexico to Northwest New Mexico. The pipeline can transport crude oil from Southeast New Mexico to the Four Corners region and south from Lynch, New Mexico to Jal, New Mexico. This pipeline provides us with an alternative method of transportation and an alternative supply of crude oil for our Four Corners refineries. In addition, along with rail deliveries, this pipeline is capable of providing enough crude oil for the two Four Corners refineries to run at increased capacity rates. Based on lower product demand in the Four Corners area, the Company’s crude oil has been removed from the pipeline and it is not being currently used to deliver crude to the Company’s Four Corners refineries. Portions of the pipeline are currently used to transport crude for unrelated third parties. The Company regularly evaluates cost effective alternative sources of crude oil and the operation of this pipeline. See Note 20, “Subsequent Events.”
     Depreciation expense was $33.5 million and $105.8 million for the three and nine months ended September 30, 2009, respectively. Depreciation expense was $28.0 million and $78.9 million for the three and nine months ended September 30, 2008, respectively.
9. Goodwill and Other Intangible Assets
     The Company’s policy is to test goodwill for impairment annually or more frequently if indications of impairment exist. Various indications of possible goodwill impairment prompted the Company to perform goodwill impairment analyses at December 31, 2008 and March 31, 2009. Management determined that no such impairment existed as of those dates. The Company’s annual impairment test was performed as of June 30, 2009. The performance of the test is a two-step process. Step 1 of the impairment test involves comparing the fair values of the applicable reporting units with their aggregate carrying values, including goodwill. If the carrying amount of a

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NOTES TO CONDENSED CONSOLIDATED FINANCIAL STATEMENTS
(UNAUDITED)
reporting unit exceeds the reporting unit’s fair value, the Company performs Step 2 of the goodwill impairment test to determine the amount of impairment loss. Step 2 of the goodwill impairment test involves comparing the implied fair value of the affected reporting unit’s goodwill against the carrying value of that goodwill.
     The Company’s impairment testing of its goodwill in Step 1 is based on the estimated fair value of its reporting units. This estimated fair value is determined based on discounted expected future cash flows supported by various other market-based valuation methods including market capitalization, earnings before interest, taxes, depreciation and amortization (“EBITDA”) multiples, and refining complexity barrels. The discounted cash flow model is sensitive to changes in future cash flow forecasts and the discount rate used. The market capitalization model is sensitive to changes in the Company’s traded stock price. The EBITDA and complexity barrel models are sensitive to changes in recent historical results of operations within the refining industry. The Company compares and contrasts the results of the various valuation models to determine if impairment exists at the end of a reporting period. The estimates and assumptions used in determining fair value of each reporting unit require considerable judgment and are based on historical experience, financial forecasts and industry trends and conditions.
     From the first to the second quarter of 2009, there was a decline in margins within the refining industry as well as a downward change in industry analysts’ forecasts for the remainder of 2009 and 2010. This, along with other negative financial forecasts released by independent refiners during the latter part of the second quarter of 2009, contributed to declines in common stock trading prices within the independent refining sector, including declines in the Company’s common stock trading price. As a result, the Company’s equity market capitalization fell below the net book value of the Company’s assets. Through the filing date of the Company’s second quarter 2009 Form 10-Q and through the end of the third quarter 2009, the trading price of the Company’s stock has experienced further reductions.
     The Company completed Step 1 of the impairment test during the second quarter of 2009 and concluded that impairment existed. The Company finalized its Step 2 analysis during the third quarter of 2009, maintaining that the Company’s prior quarter’s assumptions and forecasts had not significantly changed. Consistent with the preliminary Step 2 analysis completed during the second quarter of 2009, the Company has concluded that all of the goodwill in four of its six reporting units was impaired. The resulting non-cash charge of $299.6 million was reported in the Company’s second quarter 2009 results of operations. There were no such impairment charges in the three months ended September 30, 2009 and 2008 and nine months ended September 30, 2008.
     A summary of intangible assets that are included in “Other assets, net of amortization” in the Condensed Consolidated Balance Sheets is presented in the table below:
                                                         
    September 30, 2009     December 31, 2008        
    Gross             Net     Gross             Net     Weighted Average  
    Carrying     Accumulated     Carrying     Carrying     Accumulated     Carrying     Amortization Period  
    Value     Amortization     Value     Value     Amortization     Value     (Years)  
                    (In thousands)                          
Amortizable assets:
                                                       
Licenses and permits
  $ 52,673     $ (9,631 )   $ 43,042     $ 51,829     $ (6,563 )   $ 45,266       10.5  
Customer relationships
    6,300       (780 )     5,520       6,300       (465 )     5,835       13.2  
Rights-of-way
    4,201       (848 )     3,353       4,201       (683 )     3,518       15.2  
Other
    1,145       (585 )     560       915       (156 )     759       13.3  
 
                                           
 
    64,319       (11,844 )     52,475       63,245       (7,867 )     55,378          
 
                                           
 
                                                       
Unamortizable assets:
                                                       
Trademarks
    5,300             5,300       5,300             5,300        
Liquor licenses
    15,749             15,749       15,700             15,700        
 
                                           
 
  $ 85,368     $ (11,844 )   $ 73,524     $ 84,245     $ (7,867 )   $ 76,378          
 
                                           
     Intangible asset amortization expense for the three and nine months ended September 30, 2009, was $1.3 million and $3.6 million, respectively, based upon estimated useful lives ranging from 2 to 23 years. Intangible asset

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NOTES TO CONDENSED CONSOLIDATED FINANCIAL STATEMENTS
(UNAUDITED)
amortization expense for the three and nine months ended September 30, 2008, was $1.2 million and $3.7 million, respectively. Estimated amortization expense for the rest of this fiscal year and the next five fiscal years is as follows (in thousands):
         
2009 remainder
  $ 1,250  
2010
    4,945  
2011
    4,973  
2012
    4,948  
2013
    4,863  
2014
    4,673  
10. Accrued Liabilities
     Accrued liabilities consisted of the following:
                 
    September 30,     December 31,  
    2009     2008  
    (In thousands)  
Accrued income taxes
  $ 9,016     $  
Payroll and related costs
    38,487       39,111  
Excise taxes
    33,550       36,050  
Accrued interest
    16,554       12,661  
Property taxes
    9,310       15,354  
Environmental reserves
    7,714       9,569  
Other
    14,039       9,216  
 
           
Total
  $ 128,670     $ 121,961  
 
           
     During the third quarter 2009 the Company decreased its property tax accrual estimate by $5.0 million resulting from revised property appraisal rolls for 2006 through 2008. The revision to the property appraisal rolls also resulted in a refund of $2.9 million from various taxing authorities, further reducing the Company’s property tax expense to a total decrease of $7.9 million for the nine months ended September 30, 2009.
11. Long-Term Debt
     The Company’s long-term debt consisted of the following:
                 
    September 30,     December 31,  
    2009     2008  
    (In thousands)  
11.25% Senior Secured Notes, due 2017, net of unamortized discount of $27,187
  $ 297,813     $  
Floating Rate Senior Secured Notes, due 2014, net of unamortized discount of $21,065
    253,935        
5.75% Senior Convertible Notes, due 2014, net of unamortized discount of $58,230
    157,220        
Term Loan, due 2014
    358,057       1,280,500  
2007 Revolving Credit Agreement
          60,000  
 
           
Total long-term debt
    1,067,025       1,340,500  
Current portion of long-term debt
    (13,000 )     (13,000 )
 
           
Long-term debt, net of current portion
  $ 1,054,025     $ 1,327,500  
 
           

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WESTERN REFINING, INC. AND SUBSIDIARIES
NOTES TO CONDENSED CONSOLIDATED FINANCIAL STATEMENTS
(UNAUDITED)
Interest and other financing expenses were as follows:
                                 
    Three Months Ended     Nine Months Ended  
    September 30,     September 30,  
    2009     2008     2009     2008  
Contractual interest:
                               
11.25% Senior Secured Notes
  $ 9,344     $     $ 11,273     $  
Floating Senior Secured Notes
    7,555             9,115        
5.75% Senior Convertible Notes
    3,146             3,817        
Term Loan
    7,549       26,131       58,108       62,044  
2007 Revolving Credit Agreement
          2,584       188       6,006  
                     
 
    27,594       28,715       82,501       68,050  
                     
Amortization of original issuance discount:
                               
11.25% Senior Secured Notes
    511             617        
Floating Senior Secured Notes
    776             935        
5.75% Senior Convertible Notes
    2,193             2,650        
                     
    3,480             4,202        
                     
 
Other interest expense
    2,476       4,780       7,021       8,589  
Capitalized interest
    (526 )     (2,342 )     (5,677 )     (6,801 )
                     
 
  $ 33,024     $ 31,153     $ 88,047     $ 69,838  
                     
     Senior Secured Notes. In June 2009, the Company issued two tranches of Senior Secured Notes under an indenture dated June 12, 2009. The first tranche consisted of $325.0 million in aggregate principal amount of 11.25% Senior Secured Notes (the “Fixed Rate Notes”). The second tranche consisted of $275.0 million Senior Secured Floating Rate Notes (the “Floating Rate Notes,” and together with the Fixed Rate Notes, the “Senior Secured Notes”). The Fixed Rate Notes will pay interest semi-annually in cash in arrears on June 15 and December 15 of each year, beginning on December 15, 2009 at a rate of 11.25% per annum and will mature on June 15, 2017. The Fixed Rate Notes may be redeemed by the Company at the Company’s option beginning on June 15, 2013 through June 14, 2014 at a premium of 5.625%; from June 15, 2014 through June 14, 2015 at a premium of 2.813%; and at par thereafter. As of September 30, 2009, the fair value of the Fixed Rate Notes was $281.4 million.
     The Floating Rate Notes pay interest quarterly beginning on September 15, 2009 at a per annum rate, reset quarterly, equal to 3-month LIBOR (subject to a LIBOR floor of 3.25%) plus 7.50% and will mature on June 15, 2014. The interest rate on the Floating Rate Notes as of September 30, 2009 was 10.75%. The Floating Rate Notes may be redeemed by the Company at the Company’s option beginning on December 15, 2011 through June 14, 2012 at a premium of 5.0%; from June 15, 2012 through June 14, 2013 at a premium of 3.0%; and at a premium of 1.0% thereafter. Proceeds from the issuance of the Fixed Rate Notes were $290.7 million, net of an original issue discount of $27.8 million and underwriting discounts of $6.5 million. Proceeds from the issuance of the Floating Rate Notes were $247.5 million, net of an original issue discount of $22.0 million and underwriting discounts of $5.5 million. As of September 30, 2009, the Company had paid $2.1 million in other financing costs related to the Senior Secured Notes. The fair value of the Floating Rate Notes was $241.2 million at September 30, 2009. The Company is amortizing the original issue discounts using the effective interest method over the life of the notes. The combined proceeds from the issuance and sale of the Senior Secured Notes were used to repay a portion of the outstanding indebtedness under the Term Loan Credit Agreement (“Term Loan”).
     The Senior Secured Notes are guaranteed on a senior secured basis by all of the Company’s domestic restricted subsidiaries in existence on the date the Senior Secured Notes were issued and will be guaranteed by all future wholly-owned domestic restricted subsidiaries and by any restricted subsidiary that guarantees any of the Company’s indebtedness under credit facilities that are secured by a lien on the collateral securing the Senior Secured Notes. The Senior Secured Notes are also secured on a first-priority basis, equally and ratably with the Company’s Term Loan and any future other pari passu secured obligation, by the collateral securing the Term Loan, which consists of the Company’s fixed assets, including its refineries, and on a second-priority basis, equally and ratably with the Term Loan and any future other pari passu secured obligation, by the collateral securing the Revolving Credit Agreement, which consists of the Company’s cash, accounts receivables and inventory.
     The indenture governing the Senior Secured Notes contains covenants that limit the Company’s (and most of its subsidiaries’) ability to, among other things: (i) pay dividends or make other distributions in respect of their capital stock or make other restricted payments; (ii) make certain investments; (iii) sell certain assets; (iv) incur additional debt or issue certain preferred shares; (v) create liens on certain assets to secure debt; (vi) consolidate, merge, sell or otherwise dispose of all or substantially all of their assets; (vii) restrict dividends or other payments from restricted subsidiaries; and (viii) enter into certain transactions with their affiliates. These covenants are subject to a number of important limitations and exceptions. The indenture governing the Senior Secured Notes also provides for events

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WESTERN REFINING, INC. AND SUBSIDIARIES
NOTES TO CONDENSED CONSOLIDATED FINANCIAL STATEMENTS
(UNAUDITED)
of default, which, if any of them occurs, would permit or require the principal, premium, if any, and interest on all then outstanding Senior Secured Notes to be due and payable immediately.
     The Company may issue additional notes from time to time pursuant to the indenture governing the Senior Secured Notes.
     Convertible Senior Notes. The Company issued and sold $215.5 million in aggregate principal amount of its 5.75% Senior Convertible Notes due 2014 (the “Convertible Senior Notes”) during June and July 2009. The Convertible Senior Notes are unsecured and will pay interest semi-annually in arrears at a rate of 5.75% per year beginning on December 15, 2009. The Convertible Senior Notes will mature on June 15, 2014. The initial conversion rate for the Convertible Senior Notes is 92.5926 shares of common stock per $1,000 principal amount of Convertible Senior Notes (equivalent to an initial conversion price of approximately $10.80 per share of common stock). In lieu of delivery of shares of common stock in satisfaction of the Company’s obligation upon conversion of the Convertible Senior Notes, the Company may elect to settle conversions entirely in cash or by net share settlement. Proceeds from the issuance of the Convertible Senior Notes in June and July 2009 were $209.0 million, net of underwriting discounts of $6.5 million and were used to repay a portion of outstanding indebtedness under the Term Loan. Issuers of convertible debt instruments that may be settled in cash upon conversion (including partial cash settlement) are required to separately account for the liability and equity (conversion feature) components of the instruments in a manner reflective of the issuer’s nonconvertible debt borrowing rate. The borrowing rate used by the Company to determine the liability and equity components of the Convertible Senior Notes was 13.5%. As of September 30, 2009, the Company had paid $0.5 million in other financing costs related to the Convertible Senior Notes. The Company valued the conversion feature at $60.9 million and recorded additional paid-in capital of $36.3 million, net of deferred income taxes of $22.6 million and transaction costs of $2.0 million, related to the equity portion of this convertible debt. The discount on the Convertible Senior Notes will be amortized using the effective interest method through maturity on June 15, 2014. As of September 30, 2009, the fair value of the Convertible Senior Notes was $146.9 million and the if-converted value is less than its principal amount.
     Term Loan Credit Agreement. The Term Loan has a maturity date of May 30, 2014 and it is secured by the Company’s fixed assets, including its refineries. The Term Loan provides for principal payments on a quarterly basis of $13.0 million annually until March 31, 2014 with the remaining balance due on the maturity date. The Company made principal payments on the Term Loan of $922.4 million in the nine months ended September 30, 2009 primarily from the net proceeds of the debt and common stock offerings in June and July 2009 and $9.8 million for the same period in 2008. The average interest rates under the Term Loan for the nine months ended September 30, 2009 and 2008 were 8.46% and 6.03%, respectively. As of September 30, 2009, the interest rate under the Term Loan was 8.25%. The Company amended the Term Loan during the second quarter of 2009 in connection with the new debt offerings and to modify certain of the financial covenants. To effect this amendment, the Company paid $1.9 million in amendment fees. As a result of the partial paydown of the Term Loan in June 2009, the Company expensed $9.0 million during the second quarter to write-off a portion of the unamortized loan fees related to the Term Loan. As of September 30, 2009, the fair value of the Term Loan was $356.7 million. On June 30, 2008, the Company entered into an amendment to its term loan credit agreement. As a result of such amendment, the Company recorded an expense of $10.9 million related to the write-off of deferred loan fees incurred prior to such amendment.
     2007 Revolving Credit Agreement. The 2007 Revolving Credit Agreement matures on May 31, 2012 and provides loans of up to $800 million. The 2007 Revolving Credit Agreement, secured by certain cash, accounts receivable and inventory, can be used to refinance existing indebtedness of the Company and its subsidiaries, to finance working capital and capital expenditures and for other general corporate purposes. The 2007 Revolving Credit Agreement is a collateral-based facility with total borrowing capacity, subject to borrowing base amounts based upon eligible receivables and inventory, and provides for letters of credit and swing line loans. As of September 30, 2009, the gross availability under the 2007 Revolving Credit Agreement was $513.1 million pursuant to the borrowing base due to lower values of inventories and accounts receivable. As of September 30, 2009, the Company had net availability under the 2007 Revolving Credit Agreement of $221.1 million due to $292.0 million in letters of credit

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WESTERN REFINING, INC. AND SUBSIDIARIES
NOTES TO CONDENSED CONSOLIDATED FINANCIAL STATEMENTS
(UNAUDITED)
outstanding and no outstanding direct borrowings. As of November 6, 2009, the Company had net availability under the 2007 Revolving Credit Agreement of $253.8 million due to $272.0 million in letters of credit outstanding and $20.0 million in direct borrowings. The average interest rates under the 2007 Revolving Credit Agreement for the nine months ended September 30, 2009 and 2008 were 5.13% and 6.67%, respectively. At September 30, 2009, the interest rate under the 2007 Revolving Credit Agreement was 4.75%. The Company amended the 2007 Revolving Credit Agreement during the second quarter of 2009 in connection with the new debt offerings and to modify certain of the financial covenants.
     Guarantees of the Term Loan and the Revolving Credit Agreement. The Term Loan and the 2007 Revolving Credit Agreement (together, the “Agreements”) are guaranteed, on a joint and several basis, by subsidiaries of Western Refining, Inc. The guarantees related to the Agreements remain in effect until such time that the terms of the Agreements are satisfied and subsequently terminated. Amounts potentially due under these guarantees are equal to the amounts due and payable under the respective Agreements at any given time. No amounts have been recorded for these guarantees. The guarantees are not subject to recourse to third parties.
     Certain Covenants in Term Loan and Revolving Credit Agreement. The Agreements contain certain covenants, including limitations on debt, investments and dividends, and financial covenants relating to minimum interest coverage, maximum leverage and minimum EBITDA. Pursuant to the Agreements, the Company has also agreed to not pay cash dividends on its common stock through 2009. The Company was in compliance with all applicable covenants set forth in the Agreements at September 30, 2009. See Note 19, “Contingencies” for additional discussion of these financial covenants.
     Interest Rate Swap. On January 31, 2008, the Company entered into an amortizing LIBOR interest rate swap to manage the variability of cash flows related to the interest payments for the variable-rate term loan. The notional amount of the swap was $1.0 billion with a LIBOR interest rate fixed at 3.645% for the life of the swap. The Company designated this receive-variable and pay-fixed swap as a cash flow hedge. On August 6, 2008, the Company terminated the interest rate swap at no cost.
12. Income Taxes
     Compared to the federal statutory rate of 35%, the effective tax rate for the three and nine months ended September 30, 2009, excluding the non-deductible goodwill impairment charge from taxable income, was 66% and 25%, respectively. The effective tax rate for the nine months ended September 30, 2009 was lower than the statutory rate primarily due to the federal income tax credit available to small business refiners related to the production of ultra low sulfur diesel fuel. The effective tax rate for the three months ended September 30, 2009 was also affected by the second to third quarter revision of estimated annual taxable income. The Company has treated the non-cash goodwill impairment charge discretely, as it is not deductible for income tax purposes and is excluded from the tax rate.
     The Company is currently under examination by the Internal Revenue Service (“IRS”) for tax years ended December 31, 2006 and May 31, 2007. The May 31, 2007 tax return is the final tax return for the legacy Giant entities. The Company concluded the 2005 exam and began the 2006 exam during the third quarter of 2009. The Company continues to work with the IRS to expedite the conclusion of the 2006 and 2007 examinations. The Company does not believe the results of these examinations will have a material adverse effect on the Company’s financial position or results of operations upon conclusion. The timing and results of any final determination related to the December 31, 2006 and May 31, 2007 tax returns remain uncertain.
     The Company classifies interest to be paid on an underpayment of income taxes and any related penalties as income tax expense. Based on the results of the examination of the Company’s 2005 federal income tax return, the Company’s uncertain tax positions were settled. Accordingly, $6.3 million in estimated liabilities related to the Company’s uncertain tax positions were reversed during the third quarter of 2009, including $0.5 million that affected the Company’s effective tax rate. As of September 30, 2009, the Company had no unrecognized tax benefits.

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WESTERN REFINING, INC. AND SUBSIDIARIES
NOTES TO CONDENSED CONSOLIDATED FINANCIAL STATEMENTS
(UNAUDITED)
13. Retirement Plans
     The Company accounts for its retirement plans in accordance with FASC 715.
Pension Plans
     The Company sponsors pension plans for certain employees at the El Paso and Yorktown refineries. The components of the net periodic benefit cost associated with the Company’s pension plans were as follows:
                                 
    Three Months Ended     Nine Months Ended  
    September 30,     September 30,  
    2009     2008     2009     2008  
            (In thousands)          
Net periodic benefit cost includes:
                               
Service cost
  $ 437     $ 984     $ 2,230     $ 2,952  
Interest cost
    285       810       1,651       2,429  
Expected return on assets
    (257 )     (498 )     (1,478 )     (1,494 )
Amortization of net loss
          203       210       610  
Curtailment income
                (1,508 )      
 
                       
Net periodic benefit cost
  $ 465     $ 1,499     $ 1,105     $ 4,497  
 
                       
     In connection with the negotiation of a collective bargaining agreement covering employees of the El Paso refinery during the second quarter of 2009, the Company terminated the defined benefit plan covering certain El Paso refinery employees. Such termination is subject to regulatory approval, which may take several months. Under the agreement, the Company will pay the cash value of the accrued benefits in the benefit plan at the actuarially determined rate in effect at the time of termination or the amount shown on the covered employee’s benefit plan statement as of January 1, 2009, whichever is greater. The termination resulted in a reduction to the related pension obligation of $27.2 million, a reduction of $25.7 million to other comprehensive loss (before income taxes), and a curtailment gain of $1.5 million (before income taxes), which were recorded in the second quarter of 2009.
Postretirement Benefits
     The Company sponsors postretirement medical benefit plans for certain employees at the El Paso and Yorktown refineries. The components of net periodic benefit cost associated with the Company’s postretirement medical benefit plans were as follows:
                                 
    Three Months Ended     Nine Months Ended  
    September 30,     September 30,  
    2009     2008     2009     2008  
            (In thousands)          
Net periodic benefit cost includes:
                               
Service cost
  $ 135     $ 88     $ 405     $ 264  
Interest cost
    120       119       360       357  
Amortization of net gain
    3       (1 )     8       (1 )
 
                       
Net periodic benefit cost
  $ 258     $ 206     $ 773     $ 620  
 
                       
     The Company contributed $1.6 million for the pension plan covering certain El Paso refinery employees in the nine months ended September 30, 2009, and subject to the termination of the pension plan for the El Paso employees discussed above, does not expect to make any additional contributions during 2009. The Company contributed $3.2 million for the pension plan covering certain Yorktown refinery employees during the third quarter of 2009.

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WESTERN REFINING, INC. AND SUBSIDIARIES
NOTES TO CONDENSED CONSOLIDATED FINANCIAL STATEMENTS
(UNAUDITED)
The Company is not required to fund the postretirement medical plan for either the El Paso refinery or the Yorktown refinery on an annual basis.
14. Crude Oil and Refined Product Risk Management
     The Company enters into crude oil forward contracts to facilitate the supply of crude oil to its refineries. During the nine months ended September 30, 2009, the Company entered into net forward, fixed-price contracts to purchase and sell crude oil, which qualify as normal purchases and normal sales that are exempt from the reporting requirements of FASC 815, Derivatives and Hedging.
     The Company also uses crude oil and refined products futures, swap contracts or options to mitigate the risk of change in value for a portion of its volumes subject to market prices. Under a swap contract, the Company agrees to buy or sell an amount equal to a fixed price times a set number of barrels, and to buy or sell in return an amount equal to a specified variable price times the same amount of barrels. The physical volumes are not exchanged, and no other cash payments are made. For financial accounting purposes, when the Company enters into a derivative instrument it is either an economic hedge or a trading activity. The contract fair value is reflected on the balance sheet and the related net gain or loss is recorded as a gain or loss from derivative activities in the statement of operations. Quoted prices for similar assets or liabilities in active markets (Level 2) are considered to determine the fair values for the purpose of marking to market the derivative instruments at each period end.
     At September 30, 2009, the Company had open commodity derivative instruments consisting of crude oil and refined products price swaps on net 659,000 barrels, primarily to protect the value of certain crude oil, gasoline and blendstock inventories for the fourth quarter of 2009. These open instruments had total unrealized net losses at September 30, 2009, of $2.7 million and no unrealized gains. Open instruments with unrealized gains are reported in other current assets while open instruments with unrealized losses are reported in accrued liabilities. Deposits with brokerage firms are reported in other current assets. At December 31, 2008, the Company had open commodity derivative instruments on net 20,000 barrels. The Company did not record an unrealized gain or loss on these open positions since the fair value equaled the trade price on these swaps at December 31, 2008. The Company recognized $0.7 million in net realized and unrealized losses for the three months ended September 30, 2009 and $6.0 million in net realized and unrealized gains for the three months ended September 30, 2008, accounted for using mark-to-market accounting. The Company recognized $13.3 million and $7.8 million losses for the nine months ended September 30, 2009 and 2008, respectively.
15. Stock-Based Compensation
     Under the Western Refining Long-Term Incentive Plan, shares of restricted stock have been granted to certain employees and outside directors of the Company. These shares generally vest over a three-year period. Although ownership of the shares does not transfer to the recipients until the shares have vested, recipients have voting and nonforfeitable dividend rights on these shares from the date of grant. The fair value of each share of restricted stock awarded was measured based on the market price as of the measurement date and will be amortized on a straight-line basis over the respective vesting periods.
     The Company recorded compensation expense of $1.2 million for the three months ended September 30, 2009, of which $0.3 million was included in direct operating expenses and $0.9 million in selling, general and administrative expenses. The tax benefit related to these expenses was $0.4 million for the three months ended September 30, 2009, using a blended rate of 37.17%. The aggregate fair value at the grant date of the shares vested during the three months ended September 30, 2009 was $0.6 million. The related aggregate intrinsic value of these shares was $0.1 million at the vesting date. For the three months ended September 30, 2008, stock-based compensation expense was $1.3 million of which $0.4 million was included in direct operating expenses and $0.9 million in selling, general and administrative expenses with a related tax benefit of $0.5 million. No expense was capitalized in either period.

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WESTERN REFINING, INC. AND SUBSIDIARIES
NOTES TO CONDENSED CONSOLIDATED FINANCIAL STATEMENTS
(UNAUDITED)
     The Company recorded compensation expense of $3.5 million for the nine months ended September 30, 2009, of which $0.8 million was included in direct operating expenses and $2.7 million in selling, general and administrative expenses. The tax benefit related to these expenses was $1.3 million for the nine months ended September 30, 2009, using a blended rate of 37.17%. The aggregate fair value at the grant date of the shares vested during the nine months ended September 30, 2009 was $4.8 million. The related aggregate intrinsic value of these shares was $3.0 million at the vesting date. For the nine months ended September 30, 2008, stock-based compensation expense was $6.4 million of which $1.0 million was included in direct operating expenses and $5.4 million in selling, general and administrative expenses with a related tax benefit of $2.4 million. No expense was capitalized in either period.
     As of September 30, 2009, there were 766,826 shares of nonvested restricted stock outstanding with an aggregate fair value at grant date of $10.2 million and an aggregate intrinsic value of $4.9 million. The compensation cost of nonvested awards not recognized as of September 30, 2009 was $8.0 million, which will be recognized over a weighted average period of approximately 2.0 years. The following table summarizes the Company’s restricted stock activity for the nine months ended September 30, 2009:
                 
            Weighted-Average
            Grant-Date
    Number of Shares   Fair Value
Nonvested at December 31, 2008
    594,260     $ 18.55  
Awards granted
    242,135       12.96  
Awards vested
    (203,460 )     17.20  
Awards forfeited
    (13,059 )     27.15  
 
               
Nonvested at March 31, 2009
    619,876       16.62  
Awards granted
    132,544       9.80  
Awards vested
    (33,840 )     21.68  
 
               
Nonvested at June 30, 2009
    718,580       15.13  
Awards granted
    97,367       7.02  
Awards vested
    (15,496 )     38.43  
Awards forfeited
    (33,625 )     21.66  
 
               
Nonvested at September 30, 2009
    766,826       13.34  
 
               
     The Company’s Board of Directors authorized the issuance of up to 5,000,000 shares of common stock under the Western Refining Long-Term Incentive Plan. As of September 30, 2009, there were 1,996,384 shares of common stock reserved for future grants under this plan.
16. Stockholders’ Equity
     On June 10, 2009, the Company issued an additional 20,000,000 shares of its common stock, par value $0.01 per share at an aggregate offering price of $180.0 million. The net proceeds of this issuance were $171.0 million, net of underwriting discounts of $9.0 million. As of September 30, 2009, the Company had paid $0.6 million in issuance costs related to this offering. In addition, during June and July 2009, the Company issued and sold $215.5 million in Convertible Senior Notes and recorded additional paid-in capital of $36.3 million, net of deferred income taxes of $22.6 million and transaction costs of $2.0 million, related to the equity portion of this convertible debt. The proceeds of these issuances were used to repay a portion of the outstanding indebtedness under the Company’s Term Loan.
     During the three and nine months ended September 30, 2009, the Company repurchased 3,872 and 51,103 shares, respectively, of its common stock at an aggregate cost of less than $0.1 million and $0.6 million, respectively. These repurchases, which were recorded as treasury stock, were made to cover payroll withholding taxes for certain employees pursuant to the vesting of restricted shares awarded under the Western Refining Long-Term Incentive Plan.

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NOTES TO CONDENSED CONSOLIDATED FINANCIAL STATEMENTS
(UNAUDITED)
     On June 30, 2008, as part of the amendment to its credit facilities, the Company agreed not to declare or pay cash dividends to its common stockholders until after December 31, 2009.
17. Earnings Per Share
     On January 1, 2009, the Company adopted the provisions of FASC 260, Earnings Per Share, related to consideration of unvested share-based payment awards that contain nonforfeitable rights to dividends. The standard addresses unvested share-based payment awards that contain nonforfeitable rights to dividends or dividend equivalents and states that they are participating securities and should be included in the computation of earnings per share pursuant to the two-class method. As discussed in Note 15, “Stock-Based Compensation,” the Company has granted shares of restricted stock to certain employees and outside directors of the Company. Although ownership of these shares does not transfer to the recipients until the shares have vested, recipients have voting and nonforfeitable dividend rights on these shares from the date of grant. As a result of the adoption of this standard, the Company applied the two-class method to determine its earnings per share for all periods presented. Under the treasury stock method, the Company had previously reported $1.61 basic and diluted earnings per share for the three months ended September 30, 2008, and $1.14 basic and diluted earnings per share for the nine months ended September 30, 2008. The Company continues to use the treasury stock method to determine the amount of fully diluted shares outstanding. The dilutive calculations for the three months ended September 30, 2009, exclude 766,826 unvested shares which grant prices exceeded the average market price of the Company’s common stock.
     The reconciliation between basic and diluted earnings per share for the three and nine months ended September 30, 2009 and 2008, is presented below:
                                 
    Three Months Ended     Nine Months Ended  
    September 30,     September 30,  
    2009     2008     2009     2008  
            (In thousands, except per share data)          
Basic earnings (loss) per share:
                               
Net income (loss)
  $ (4,782 )   $ 109,237     $ (253,171 )   $ 77,026  
Dividends paid
                      (8,182 )
(Income) loss allocated to participating securities
    39       (989 )     2,136       (562 )
 
                       
Net income (loss) available to common shareholders
  $ (4,743 )   $ 108,248     $ (251,035 )   $ 68,282  
 
                       
 
                               
Weighted average number of common shares outstanding:
                               
Basic number of common shares outstanding
    87,973       67,760       76,191       67,696  
Dilutive effect of participating securities:
                               
Unvested restricted stock
                      56  
Convertible Senior Notes
                       
 
                       
Dilutive number of common shares outstanding
    87,973       67,760       76,191       67,752  
 
                       
 
                               
Basic earnings (loss) per common share
  $ (0.05 )   $ 1.60     $ (3.29 )   $ 1.13  
 
                       
 
                               
Diluted earnings (loss) per common share
  $ (0.05 )   $ 1.60     $ (3.29 )   $ 1.13  
 
                       

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(UNAUDITED)
18. Related Party Transactions
     Effective May 1, 2009, the non-exclusive aircraft lease with an entity controlled by the Company’s majority stockholder was terminated by the Company and as a result, it no longer operates a private aircraft. The hourly rental payment was $1,775 per flight hour and the Company was responsible for all operating and maintenance costs of the aircraft. Personal use of the aircraft by certain officers of the Company was reimbursed to the Company at the highest rate allowed by the Federal Aviation Administration for a non-charter operator. In addition, the Company had a policy requiring that its officers deposit in advance of any personal use of the aircraft an amount equal to three months of anticipated expenses for the use of the aircraft. The following table summarizes the total costs incurred for the lease of the aircraft for the three and nine months ended September 30, 2009 and 2008:
                                 
    Three Months Ended     Nine Months Ended  
    September 30,     September 30,  
    2009     2008     2009     2008  
            (In thousands)          
Lease payments
  $     $ 163     $ 181     $ 456  
Operating and maintenance expenses
          283       456       948  
Reimbursed by officers
          (134 )     (321 )     (457 )
 
                       
Total costs
  $     $ 312     $ 316     $ 947  
 
                       
     The Company sells refined products to Transmountain Oil Company, L.C. (“Transmountain”), which is a distributor in the El Paso area. An entity controlled by the Company’s majority stockholder acquired a 61.1% interest in Transmountain on June 30, 2004, and acquired the remaining interest in February 2008. On November 18, 2008, Transmountain was sold to another entity and is no longer a related party to the Company. All accounts receivable were assumed by the third party on that date. Sales to Transmountain totaled $15.6 million and $75.1 million for the three and nine months ended September 30, 2008.
     The Company had entered into a lease agreement with Transmountain, pursuant to which Transmountain leased certain office space from the Company. The lease commenced on December 1, 2005, for a period of ten years and contains two five-year renewal options. The lease was assumed by a third party as of November 18, 2008, and was subsequently terminated in March 2009. The monthly base rental was $6,800. Rental payments received from Transmountain were $20,400 and $61,200 for the three and nine months ended September 30, 2008.
19. Contingencies
Environmental Matters
     Like other petroleum refiners, the Company’s operations are subject to extensive and periodically changing federal and state environmental regulations governing air emissions, waste water discharges, and solid and hazardous waste management activities. The Company’s policy is to accrue environmental and clean-up related costs of a non-capital nature when it is probable that a liability has been incurred and the amount can be reasonably estimated. Such estimates may be subject to revision in the future as regulations and other conditions change.
     Periodically, the Company receives communications from various federal, state and local governmental authorities asserting violation(s) of environmental laws and/or regulations. These governmental entities may also propose or assess fines or require corrective action for these asserted violations. The Company intends to respond in a timely manner to all such communications and to take appropriate corrective action. The Company does not anticipate that any such matters currently asserted will have a material adverse effect on its financial condition, results of operations or cash flows.
     Environmental remediation accruals are recorded in the current and long-term sections of the Company’s Condensed Consolidated Balance Sheet, according to their nature. As of September 30, 2009, the Company had environmental liability accruals of approximately $30.8 million, of which $7.7 million is in current liabilities. As of

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(UNAUDITED)
December 31, 2008, the Company had environmental liability accruals of approximately $31.7 million, of which $9.6 million was in accrued liabilities. As of September 30, 2009, the unescalated, undiscounted environmental reserve related to these liabilities totaled $39.2 million, leaving $9.1 million to be accreted over time. The table below summarizes the Company’s environmental liability accruals:
                                 
    December 31,     Increase             September 30,  
    2008     (Decrease)     Payments     2009  
            (In thousands)          
Yorktown refinery
  $ 25,926     $ 713     $ (1,402 )   $ 25,237  
Four Corners and other
    5,757       825       (979 )     5,603  
 
                       
Totals
  $ 31,683     $ 1,538     $ (2,381 )   $ 30,840  
 
                       
El Paso Refinery
     The groundwater and certain solid waste management units and other areas at and adjacent to the El Paso refinery have been impacted by prior spills, releases and discharges of petroleum or hazardous substances and are currently undergoing remediation by the Company and Chevron Products Company (“Chevron”) pursuant to certain agreed administrative orders with the Texas Commission on Environmental Quality (“TCEQ”). Pursuant to the Company’s purchase of the north side of the El Paso refinery from Chevron, Chevron retained responsibility to remediate their solid waste management units in accordance with its Resource Conservation Recovery Act (“RCRA”) permit, which Chevron has fulfilled, and retained liability for, and control of, certain groundwater remediation responsibilities.
     In May 2000, the Company entered into an Agreed Order with the Texas Natural Resources Conservation Commission for remediation of the south side of the El Paso refinery property. On August 7, 2000, the Company purchased a Pollution and Legal Liability and Clean-Up Cost Cap Insurance policy at a cost of $10.3 million, which the Company expensed in fiscal 2000. The policy is non-cancelable and covers environmental clean-up costs related to contamination that occurred prior to December 31, 1999, including the costs of the Agreed Order activities. The insurance provider assumes responsibility for all environmental clean-up costs related to the Agreed Order up to $20 million. In addition, under a settlement agreement with the Company, a subsidiary of Chevron is obligated to pay 60% of any Agreed Order environmental clean-up costs that would otherwise have been covered under the policy but that exceed the $20 million threshold. Under the policy, environmental costs outside the scope of the Agreed Order are covered up to $20 million and require payment by the Company of a deductible as well as any costs that exceed the covered limits of the insurance policy.
     The U.S. Environmental Protection Agency (“EPA”) has embarked on a Petroleum Refinery Enforcement Initiative (“EPA Initiative”) whereby it is investigating industry-wide noncompliance with certain Clean Air Act rules. The EPA Initiative has resulted in many refiners entering into consent decrees typically requiring substantial capital expenditures for additional air pollution control equipment and penalties. Since December 2003, the Company has been voluntarily discussing a settlement pursuant to the EPA Initiative related to the El Paso refinery. Negotiations with the EPA regarding this Initiative have focused exclusively on air emission programs. The Company does not expect these negotiations to result in any soil or groundwater remediation or clean-up requirements. In May 2008, the EPA and the Company agreed on the basic EPA Initiative requirements related to the Fluid Catalytic Cracking Unit (“FCCU”) and heaters and boilers that the Company expects will ultimately be incorporated into a final settlement agreement between the Company and the EPA. Based on current negotiations and information, the Company estimates the total capital expenditures necessary to address the EPA Initiative issues would be approximately $69 million of which $38.4 million has already been spent: $15.2 million for the installation of a flare gas recovery system which was completed in 2007 and $23.3 million for nitrogen oxides (“NOx”) emission controls on heaters and boilers was expended in 2008 and the first three quarters of 2009. The Company estimates remaining expenditures of approximately $31 million for the NOx emission controls on heaters and boilers from the third quarter of 2009 through 2013. This $31 million amount has been included in the Company’s estimated capital expenditures for regulatory projects and could change depending upon the actual final

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(UNAUDITED)
settlement reached. Regarding the FCCU, the Company anticipates additional operating expenses to purchase catalyst emission reducing additives that the Company anticipates will allow it to meet the EPA Initiative NOx requirements for the FCCU. Additional capital expenditures, however, may be required if these additives are not effective in reducing NOx emissions from the FCCU.
     The Company received a proposed draft settlement agreement from the EPA in April 2009. In August 2009, the EPA proposed a penalty of $1.5 million in the process of finalizing the settlement. As of September 30, 2009, the Company had accrued $1.5 million in penalties for this matter. As of September 30, 2009, a final settlement is still pending.
     The TCEQ has notified the Company that it will be presenting the Company with a proposed Agreed Order regarding six excess air emission incidents that occurred at the El Paso refinery during 2007 and early 2008. While at this time it is not known precisely how or when the Agreed Order may affect the Company, the Company expects corrective action to be requested with the Agreed Order and may be assessed penalties. The Company does not expect any penalties or corrective action requested to have a material adverse effect on its business, financial condition, or results of operations or that any penalties assessed or increased costs associated with the corrective action will be material.
Yorktown Refinery
     Yorktown 1991 and 2006 Orders. Giant and a subsidiary company, assumed certain liabilities and obligations in connection with the 2002 purchase of the Yorktown refinery from BP Corporation North America Inc. and BP Products North America Inc. (collectively “BP”). BP, however, agreed to reimburse Giant for all losses that are caused by or relate to property damage caused by, or any environmental remediation required due to, a violation of environmental, health, and safety laws during BP’s operation of the refinery, subject to certain limitations. BP’s liability for reimbursement is limited to $35 million. Amounts due from BP and the related reserve for doubtful accounts of $10 million have been reclassified to other assets at December 31, 2008, to conform to the current presentation.
     In August 2006, Giant agreed to the terms of the final administrative consent order pursuant to which Giant will implement a clean-up plan for the refinery. Following the acquisition of Giant, the Company completed the first phase of the plan and is in the process of negotiating revisions with the EPA for the remainder of the clean-up plan.
     The Company currently estimates that expenditures associated with the EPA order are approximately $46.4 million (up to $35 million of which the Company believes is subject to reimbursement by BP). The discounted value of this liability assumed from Giant on May 31, 2007, was $35.5 million. The Company has incurred $18.9 million through the third quarter of 2009 related to the EPA order and believes that approximately $12.6 million will be incurred between the remainder of 2009 through 2011. The remainder will be expended over a 29-year period following construction. The Company is currently evaluating revised designs and specifications of the Company’s clean-up plan to implement the EPA Order. If determined to be feasible, and upon receiving EPA approval, these changes could result in reductions to the cost estimates.
     During 2007, in response to the first claim requesting reimbursement from BP, the Company received a letter from BP disputing indemnification for these costs.
     Yorktown 2002 Amended Consent Decree. In May 2002, Giant acquired the Yorktown refinery and assumed certain environmental obligations including responsibilities under a consent decree among various parties covering many locations (the “Consent Decree”) entered in August 2001 under the EPA Initiative. Parties to the Consent Decree include the United States, BP Exploration and Oil Co., Amoco Oil Company, and Atlantic Richfield Company. As applicable to the Yorktown refinery, the Consent Decree required, among other things, a reduction of NOx, sulfur dioxide, and particulate matter emissions and upgrades to the refinery’s leak detection and repair program. The Company does not expect implementation of the Consent Decree requirements will result in any soil or groundwater remediation or clean-up requirements. Pursuant to the Consent Decree and prior to May 31, 2007,

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NOTES TO CONDENSED CONSOLIDATED FINANCIAL STATEMENTS
(UNAUDITED)
Giant had installed a new sour water stripper and sulfur recovery unit with a tail gas treating unit and an electrostatic precipitator on the FCCU and had begun using sulfur dioxide emissions reducing catalyst additives in the FCCU. The Company estimates additional capital expenditures of approximately $1.5 million to complete implementation of the Consent Decree requirements. The schedule for project implementation has not been defined. The Company does not expect completing the requirements of the Consent Decree to have a material adverse effect on its business, financial condition, or results of operations or increased operating costs related to the EPA Initiative will be material.
Four Corners Refineries
     Four Corners 2005 Consent Agreements. In July 2005, as part of the EPA Initiative, Giant reached an administrative settlement with the New Mexico Environmental Department (“NMED”) and the EPA in the form of consent agreements that resolved certain alleged violations of air quality regulations at the Gallup and Bloomfield refineries in the Four Corners area of New Mexico (“the 2005 NMED Agreement”). In January 2009, the Company and the NMED agreed to an amendment of the 2005 administrative settlement with the NMED (“the 2009 NMED Amendment”) which altered certain deadlines and allowed for alternative air pollution controls.
     Based on current information and the 2009 NMED Amendment, the Company estimates the total remaining capital expenditures that may be required pursuant to the 2009 NMED Amendment would be approximately $47 million and will occur primarily from 2009 through 2012. These capital expenditures will primarily be for installation of emission controls on the heaters and boilers, and for reducing sulfur in fuel gas to reduce emissions of sulfur dioxide and NOx from the refineries. The 2009 NMED Amendment also provided for a $2.3 million penalty of which $0.2 million of the penalty was paid in January 2009 and another $0.2 million was paid in July 2009. The entire remaining penalty of $1.9 million, which was accrued during the first quarter of 2009, is to be paid to fund Supplemental Environmental Projects in the State of New Mexico and it is included in accrued liabilities. The Company submitted proposed projects to the NMED in April 2009 for the remainder of the penalty. The NMED rejected the proposed project and requested that the Company submit alternative proposed projects in the near future. In October 2009, the NMED accepted one of the Company’s alternative proposed projects. The schedule of payments of the remaining penalty will be in three equal payments with the first to be made by November 30, 2009 and the last by September 1, 2010. The Company does not expect implementation of the requirements in the 2005 NMED Agreement and the associated 2009 NMED Amendment will result in any soil or groundwater remediation or clean-up costs.
     Bloomfield 2007 NMED Remediation Order. In July 2007, the Company received a final administrative compliance order from the NMED alleging that releases of contaminants and hazardous substances that have occurred at the Bloomfield refinery over the course of its operation prior to June 1, 2007, have resulted in soil and groundwater contamination. Among other things, the order requires the Company to:
    investigate and determine the nature and extent of such releases of contaminants and hazardous substances;
 
    perform interim remediation measures, or continue interim measures already begun, to mitigate any potential threats to human health or the environment from such releases;
 
    identify and evaluate alternatives for corrective measures to clean up any contaminants and hazardous substances released at the refinery and prevent or mitigate their migration at or from the site;
 
    implement any corrective measures that may be approved by the NMED;
 
    develop investigation work plans over a period of approximately four years; and
 
    implement corrective measures pursuant to the investigation.

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NOTES TO CONDENSED CONSOLIDATED FINANCIAL STATEMENTS
(UNAUDITED)
     The order recognizes that prior work satisfactorily completed may fulfill some of the foregoing requirements. In that regard, the Company has already put in place some remediation measures with the approval of the NMED or New Mexico Oil Conservation Division.
     Based on current information, the Company has prepared an initial undiscounted cost estimate of $3.9 million for implementing the final order. Accordingly, the Company has recorded a discounted liability of $2.1 million relating to the final order implementation costs. As of September 30, 2009, the Company had expended $1.9 million to implement the order.
     Gallup 2007 RCRA Inspection. In September 2007, the Gallup refinery was inspected jointly by the EPA and the NMED (“the Gallup 2007 RCRA Inspection”) to determine compliance with the EPA’s hazardous waste regulations promulgated pursuant to the RCRA. In February 2009, the Company met with representatives from the EPA Region 6 and the NMED to discuss the inspection. In April 2009, the Company received a draft settlement and a proposed corrective action from the EPA and, during the first quarter of 2009, accrued $0.7 million for a proposed penalty related to this matter. The Company reached a final settlement with the agencies in August 2009 and paid a penalty of $0.7 million in October 2009 pursuant to the final settlement. The Company does not expect implementation of the requirements in the final settlement will result in any soil or groundwater remediation or clean-up costs. Based on current information, the Company estimates capital expenditures of approximately $5.0 million to upgrade the wastewater treatment plant pursuant to the requirements of the final settlement.
Legal Matters
     Lawsuits have been filed in numerous states alleging that methyl tertiary butyl ether (“MTBE”), a high octane blendstock used by many refiners in producing specially formulated gasoline, has contaminated water supplies. MTBE contamination primarily results from leaking underground or aboveground storage tanks. The suits allege MTBE contamination of water supplies owned and operated by the plaintiffs, who are generally water providers or governmental entities. The plaintiffs assert that numerous refiners, distributors or sellers of MTBE and/or gasoline containing MTBE are responsible for the contamination. The plaintiffs also claim that the defendants are jointly and severally liable for compensatory and punitive damages, costs and interest. Joint and several liability means that each defendant may be liable for all of the damages even though that party was responsible for only a small part of the damages.
     As a result of the acquisition of Giant, certain of the subsidiaries of the Company were defendants in approximately 40 of these MTBE lawsuits pending in Virginia, Connecticut, Massachusetts, New Hampshire, New York, New Jersey, Pennsylvania, Florida and New Mexico. The Company and its subsidiaries have reached settlement agreements regarding most of these lawsuits, including the New Mexico suit. After these settlement agreements, there are currently a total of twelve lawsuits pending in New York, New Hampshire and New Jersey. The settlements referenced above were not material individually or in the aggregate to the Company’s business, financial condition or results of operations.
     Western also has been named as a defendant in a lawsuit filed by the State of New Jersey related to MTBE. Western has never done business in New Jersey and has never sold any products in that state or that could have reached that state. Western is defending itself accordingly.
     Owners of a small hotel in Aztec, New Mexico, filed a lawsuit in San Juan County, New Mexico alleging migration of underground gasoline onto their property from underground storage tanks located on a convenience store property across the street, which is owned by a subsidiary of the Company. Plaintiffs claim a component of the gasoline, MTBE, has contaminated their property. The Company disputes these claims and is defending itself accordingly.
     In April 2003, the Company received a payment of reparations in the amount of $6.8 million from a pipeline company as ordered by the Federal Energy Regulatory Commission (“FERC”). Following judicial review of the FERC order, as well as a series of other orders, the pipeline company made a Compliance Filing in February 2008 in

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NOTES TO CONDENSED CONSOLIDATED FINANCIAL STATEMENTS
(UNAUDITED)
which it asserts it overpaid reparations to the Company in a total amount of $1.1 million and refunds in the amount of $0.7 million, including accrued interest through February 29, 2008, and that interest should continue to accrue on those amounts. In the February 2008 Compliance Filing, the pipeline company also indicated that in a separate FERC proceeding, it owes the Company an additional amount of reparations and refunds of $5.2 million including interest through February 29, 2008. While this amount is subject to adjustment upward or downward based on further orders of the FERC and on appeal, interest on the amount owed to the Company should continue to accrue until the pipeline company makes payment to the Company.
     A subsidiary of the Company, Western Refining Yorktown, Inc. (“Western Yorktown”), declared force majeure under its crude oil supply agreement with Statoil Marketing and Trading (USA), Inc. (“Statoil”) based on the effects of the Grane crude oil on its Yorktown refinery plant and equipment. Statoil filed a lawsuit against the subsidiary on March 28, 2008, in the Superior Court of Delaware in and for New Castle County. The lawsuit alleges breach of contract and other related claims by the subsidiary in connection with the crude oil supply agreement and alleges Statoil is entitled to recover damages in excess of $100 million. The Court has set this matter for trial in October 2010. Western Yorktown believes its declaration of force majeure was in accordance with the contract, disputes Statoil’s claims and intends to vigorously defend itself against them.
     On February 25, 2008, a subsidiary of the Company that operates pipelines had Protests filed against its tariffs for its 16-inch pipeline running from Lynch, New Mexico to Bisti, New Mexico and connecting to Midland, Texas before the FERC by Resolute Natural Resources Company and Resolute Aneth, LLC (“Resolute”), the Navajo Nation and Navajo Nation Oil & Gas Company (“NNOG”). On March 7, 2008, the FERC dismissed these Protests. Resolute and NNOG then filed a request for reconsideration with the FERC, which the FERC denied confirming its earlier dismissal of these Protests. Resolute and NNOG have appealed this ruling to the United States Court of Appeals for the D.C. Circuit. After first requesting the D.C. Circuit dismiss their appeals, Resolute and NNOG are now attempting to pursue their appeals.
     A lawsuit has been filed in the Federal District Court for the District of New Mexico by certain Plaintiffs who allege the Bureau of Indian Affairs (“BIA”), acted improperly in approving certain rights-of-way on land allotted to the individual Plaintiffs by the Navajo Nation, Arizona, New Mexico and Utah (“Navajo Nation”). The lawsuit names the Company and numerous other defendants (“Right-of-Way Defendants”), and seeks imposition of a constructive trust and asserts these Right-of-Way Defendants are in trespass on the Allottee’s lands. The Company disputes these claims and is defending itself accordingly.
     In February 2009, subsidiaries of the Company, Western Refining Pipeline, Company. (“Western Pipeline”) and Western Refining Southwest, Inc. (“Western Southwest”) filed a Compliant at the FERC against TEPPCO Crude Pipeline, LLC (“TEPPCO Pipeline”) and TEPPCO Crude Oil, LLC (“TEPPCO Crude”) and collectively (“TEPPCO”), asserting violations of the Interstate Commerce Act and breaches of contracts between the parties including that TEPPCO Pipeline had wrongfully seized crude oil belonging to Western Southwest and wrongfully taken pipeline capacity lease payments from Western Pipeline in a cumulative amount in excess of $5 million. After filing this Complaint, Western Pipeline and Western Southwest gave TEPPCO Pipeline and TEPPCO Crude notification of termination of pipeline capacity lease agreements and a crude oil purchase agreement with TEPPCO Pipeline and TEPPCO Crude. FERC dismissed the Complaint on the basis that it does not have jurisdiction. Western Pipeline and Western Southwest requested the FERC to reconsider its dismissal and the FERC has denied this request for reconsideration. Western Pipeline and Western Southwest are evaluating their options and at this time anticipate appealing the FERC’s dismissal. After the initial FERC dismissal, TEPPCO Pipeline and TEPPCO Crude filed a lawsuit against Western Pipeline and Western Southwest in the Midland Texas District Court which alleges breach of contract and seeks damages in excess of $10 million. Western Pipeline and Western Southwest believe their termination of the contracts was appropriate and believe that TEPPCO owes

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NOTES TO CONDENSED CONSOLIDATED FINANCIAL STATEMENTS
(UNAUDITED)
Western compensation for the crude oil that TEPPCO wrongfully seized. Western intends to defend itself against TEPPCO’s claims accordingly.
     Regarding the claims asserted against the Company referenced above, potentially applicable factual and legal issues have not been resolved, the Company has yet to determine if a liability is probable and the Company cannot reasonably estimate the amount of any loss associated with these matters. Accordingly, the Company has not recorded a liability for these pending lawsuits.
Other Matters
     Certain rights-of-way necessary for the Company’s crude oil pipeline system to deliver crude oil to its Four Corners refineries must be renewed periodically. One of these rights-of-way for the 16-inch pipeline owned by a subsidiary of the Company has expired but it is in the process of being renewed. Other of these rights-of-way expire in the next four months. The Company has been and currently is in negotiations with the Navajo Nation regarding the renewal of certain of these rights-of-way.
     The Company’s refining margins have deteriorated in the latter part of 2009 due to increases in feedstock costs and lower increases in gasoline prices as well as decreased demand. As a result, earnings and cash flows have been negatively impacted. If margins continue to deteriorate, or if earnings and cash flows continue to suffer for any other reason, the Company may be unable to comply with the financial covenants set forth in its credit facilities. Failure to satisfy these covenants could result in the Company being prohibited from borrowing under its revolving credit facility, which would hinder its ability to purchase sufficient quantities of crude oil to operate its refineries at planned rates. This, in turn, could have a negative impact on the Company’s ability to generate sufficient cash flows from operations.
      The Company is currently considering raising additional funds through public or private equity or debt financings to refinance the remaining balance on our term loan. The Company has also begun the process to seek amendments to certain of the convents in its credit agreements. Although the Company was in compliance with these covenants through the end of the third quarter of 2009, it believes it is prudent to start this process in the event that the low refining margin environment continues for an extended period of time. The Company can give no assurances that it will be able to raise any additional funds or amend these financial covenants on terms favorable to it, or at all. If additional funds are obtained by issuing equity securities, the Company’s existing stockholders could be diluted. The Company is also considering potential asset sales and other operational initiatives. Given current market conditions the Company is not optimistic about the sale of any assets in the near term.
     The Company is party to various other claims and legal actions arising in the normal course of business. The Company believes that the resolution of these matters will not have a material adverse effect on its financial condition, results of operations or cash flows.

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20. Subsequent Events
     On November 5, 2009, management decided to consolidate the operations of its two Four Corners refineries into a single operation at the Gallup refinery. Management believes that this consolidation will eliminate certain operating costs beginning in the first quarter of 2010 while maintaining the capability to process the same volumes of crude that have been recently processed at both Bloomfield and Gallup combined. The Company will continue to operate the Bloomfield products terminal and will supply the Four Corners area with refined products through the utilization of new pipeline connection and exchange supply agreements. The Company will also maintain its marketing assets, and through the long-term exchange agreement, will supply barrels to Bloomfield in exchange for barrels produced at the El Paso refinery. Management is evaluating alternative uses for the Bloomfield refinery including the possibility of biofuels production. As a result of the refinery consolidation, the Company expects to take pre-tax charges against earnings in the fourth quarter of 2009 of between $55 and $65 million, the majority of which will be non-cash. These charges will be primarily related to asset impairments and idling costs.

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Item 2.   Management’s Discussion and Analysis of Financial Condition and Results of Operations
     You should read the following discussion together with the financial statements and the notes thereto included elsewhere in this report. This discussion contains forward-looking statements that are based on management’s current expectations, estimates and projections about our business and operations. The cautionary statements made in this report should be read as applying to all related forward-looking statements wherever they appear in this report. Our actual results may differ materially from those currently anticipated and expressed in such forward-looking statements as a result of a number of factors; including those we discuss under Part I. — Item 1A. “Risk Factors” included in our Annual Report on Form 10-K for the year ended December 31, 2008, or 2008 Form 10-K, under Part II — Item 1A “Risk Factors” in our Quarterly Report on Form 10-Q for the quarter ended June 30, 2009, and elsewhere in this report. You should read such “Risk Factors” and “Forward-Looking Statements” in this report. In this Item 2, all references to “Western Refining,” “the Company,” “Western,” “we,” “us,” and “our” refer to Western Refining, Inc., or WNR, and the entities that became its subsidiaries upon closing of our initial public offering (including Western Refining Company, L.P., or Western Refining LP), and Giant Industries, Inc. and its subsidiaries, or Giant, which became wholly-owned subsidiaries on May 31, 2007, unless the context otherwise requires or where otherwise indicated.
Company Overview
     We are an independent crude oil refiner and marketer of refined products and also operate service stations and convenience stores. We own and operate four refineries with a total crude oil throughput capacity of approximately 238,000 barrels per day, or bpd. In addition to our 128,000 bpd refinery in El Paso, Texas, we also own and operate a 70,000 bpd refinery on the East Coast of the United States near Yorktown, Virginia, and two refineries in the Four Corners region of Northern New Mexico with a combined throughput capacity of 40,000 bpd. Our primary operating areas encompass West Texas, Arizona, New Mexico, Utah, Colorado, and the Mid-Atlantic region. In addition to the refineries, we also own and operate stand-alone refined products terminals in Flagstaff, Arizona and Albuquerque, New Mexico, as well as asphalt terminals in Phoenix, Arizona; Tucson, Arizona; Albuquerque; and El Paso. As of September 30, 2009, we also own and operate 152 retail service stations and convenience stores in Arizona, Colorado and New Mexico, a fleet of crude oil and refined product truck transports, and a wholesale petroleum products distributor, that operates in Arizona, California, Colorado, Nevada, New Mexico, Texas, and Utah.
     We report our operating results in three business segments: the refining group, the retail group, and the wholesale group. Our refining group operates the four refineries and related stand-alone refined products terminals and asphalt terminals. At the refineries, we refine crude oil and other feedstocks into refined products such as gasoline, diesel fuel, jet fuel, and asphalt. Our refineries market refined products to a diverse customer base including wholesale distributors and retail chains. Our retail group operates service stations and convenience stores and sells gasoline, diesel fuel, and merchandise. Our wholesale group distributes gasoline, diesel fuel, and lubricant products. See Note 3, “Segment Information” in the Notes to Condensed Consolidated Financial Statements included in this quarterly report for detailed information on our operating results by segment.
     Since the acquisition of Giant in 2007, we have increased our sour and heavy crude oil processing capacity as a percent of our total crude oil capacity from 12% prior to the acquisition to approximately 41% as of September 30, 2009. Sour and heavy crude oil has historically been less expensive to acquire than light sweet crude oil, however, the differentials have narrowed in the second and third quarter of 2009. We have deferred certain smaller projects at our south crude unit in El Paso due to the narrow spread between sweet and sour crude oil and the overall economic environment. Deferment of the crude unit projects will limit sour runs to our current combined sour and heavy crude oil processing capability at maximum throughput until the projects in the crude unit are complete. The gasoline desulfurization unit started in May 2009 and has allowed for higher sour rates since startup. The Yorktown refinery also has the flexibility for future growth initiatives given its ability to process cost-advantaged feedstocks. With the acquisition, we also gained a diverse mix of complementary retail and wholesale businesses.
     We own a pipeline that runs from Southeast New Mexico to Northwest New Mexico. The pipeline can transport crude oil from Southeast New Mexico to the Four Corners region and south from Lynch, New Mexico to Jal, New Mexico. This pipeline, provides us with an alternative method of transportation and an alternative supply of crude oil for our Four Corners refineries. In addition, along with rail deliveries, this pipeline is capable of providing enough crude oil for the two Four Corners refineries to run at increased capacity rates. Based on lower product demand in the Four Corners area, our crude oil has been removed from the pipeline and it is not being currently used to deliver crude to our Four Corners refineries. Portions of the pipeline are currently used to transport crude for unrelated third parties. We regularly

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evaluate cost effective and alternative sources of crude oil and operations of this pipeline. See Item 1A. “Risk Factors — We may not be able to run our Four Corners refineries at increased rates” in our 2008 Form 10-K.
Major Influences on Results of Operations
     Refining. Our earnings and cash flows from our refining operations are primarily affected by the difference between refined product prices and the prices for crude oil and other feedstocks, all of which are commodities. The cost to acquire feedstocks and the price of the refined products that we ultimately sell depend on numerous factors beyond our control. These factors include the supply of, and demand for, crude oil, gasoline and other refined products, which in turn depend on changes in domestic and foreign economies; weather conditions; domestic and foreign political affairs; production levels; the availability of imports; the marketing of competitive fuels; the differentials on sour and heavy crude oils versus light sweet crude oils; and government regulation. While our net sales fluctuate significantly with movements in crude oil and refined product prices, it is primarily the spread between crude oil and refined product prices that affects our earnings and cash flows from our operations. Refining margins have been extremely volatile in 2008 and 2009. While gasoline margins have somewhat improved during the first nine months of 2009 compared to the same period in 2008, diesel margins have been significantly weaker in 2009. The benchmark Gulf Coast diesel fuel price compared to West Texas Intermediate, or WTI, crude oil for the nine months ended September 30, 2009 averaged $8.61 margin per barrel compared to $24.41 margin per barrel for the same period in 2008. Additionally, the increase in the price of crude oil during the second and third quarters of 2009 significantly reduced margins on asphalt and coke as compared to the first quarter of 2009. Another factor that reduced margins during the second and third quarters of 2009 was the narrowing of differentials on sour and heavy crude oils versus light sweet crude oils. In addition, we had a decrease in the lower of cost or market, or LCM, reserve from December 31, 2008 to September 30, 2009 of $61.0 million to value our Yorktown inventories to net realizable market values as a result of increasing crude oil, blendstocks and refined products prices, which also increased our refining margins.
     In addition, other factors that impact our overall refinery gross margins are the sale of lower value products such as residuum, petroleum coke and propane, particularly when crude costs are higher. In addition, our refinery gross margin is further reduced because our refinery product yield is less than our total refinery throughput volume. Our results of operations are also significantly affected by our refineries’ direct operating expenses, especially the cost of natural gas used for fuel and the cost of electricity. Natural gas prices have historically been volatile. Typically, electricity prices fluctuate with natural gas prices.
     Demand for gasoline is generally higher during the summer months than during the winter months. In addition, higher volumes of ethanol are blended with gasoline produced in the Southwest region during the winter months, thereby increasing the supply of gasoline. This combination of decreased demand and increased supply during the winter months can lower gasoline prices. As a result, our operating results for the first and fourth calendar quarters are generally lower than those for the second and third calendar quarters of each year. The effects of seasonal demand for gasoline are partially offset by increased demand during the winter months for diesel fuel in the Southwest and heating oil in the Northeast. Throughout 2009, however, refining margins have been extremely volatile and our results of operations do not reflect these seasonal trends.
     Safety, reliability and the environmental performance of our refineries’ operations are critical to our financial performance. Unplanned downtime of our refineries generally results in lost refinery gross margin opportunity, increased maintenance costs and a temporary increase in working capital investment and inventory. We attempt to mitigate the financial impact of planned downtime, such as a turnaround or a major maintenance project, through a planning process that considers product availability, margin environment and the availability of resources to perform the required maintenance.

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     Periodically we have planned maintenance turnarounds at our refineries, which are expensed as incurred. We shut down the south crude unit for 13 days at the El Paso refinery in the second quarter of 2009 and we performed a crude unit inspection outage for 20 days at the Yorktown refinery in October 2009. Also, we have scheduled a turnaround at the south side of the El Paso refinery for the first quarter of 2010 and are evaluating the possibility of crude and coker unit turnarounds at the Yorktown refinery during the fall of 2010.
     The nature of our business requires us to maintain substantial quantities of crude oil and refined product inventories. Because crude oil and refined products are commodities, we have no control over the changing market value of these inventories. Our inventory of crude oil and refined products is valued at the lower of cost or market value under the last-in, first-out, or LIFO, inventory valuation methodology. For periods in which the market price declines below our LIFO cost basis, we are subject to significant fluctuations in the recorded value of our inventory and related cost of products sold. As a result of increasing market prices of crude oil, blendstocks and refined products, we had a net change in the lower of cost or market, or LCM, reserve from December 31, 2008 to September 30, 2009 of $61.0 million to value our Yorktown inventories to net realizable market values, which decreased cost of products sold and increased refinery gross margin for the nine months ended September 30, 2009. In addition, due to the volatility in the price of crude oil and other blendstocks, we experienced fluctuations in our LIFO reserves between 2008 and 2009. We also experienced LIFO liquidations based on permanent decreased levels in our inventories. These LIFO liquidations resulted in a decrease in cost of products sold of $7.5 million and $57.5 million for the three and nine months ended September 30, 2008, respectively. There were no LIFO liquidations during the three and nine months ended September 30, 2009. See Note 5, “Inventories” in the Notes to Condensed Consolidated Financial Statements included in this quarterly report for detailed information on the impact of LIFO inventory accounting.
     Retail. Our earnings and cash flows from our retail business segment are primarily affected by the sales volumes and margins of gasoline and diesel fuel sold, and by the sales and margins of merchandise sold at our service stations and convenience stores. Margins for gasoline and diesel fuel sales are equal to the sales price less the delivered cost of the fuel and motor fuel taxes, and are measured on a cents per gallon, or cpg, basis. Fuel margins are impacted by local supply, demand, and competition. Margins for retail merchandise sold are equal to retail merchandise sales less the delivered cost of the merchandise, net of supplier discounts and inventory shrinkage, and are measured as a percentage of merchandise sales. Merchandise sales are impacted by convenience or location, branding, and competition. Our retail sales are seasonal. Our retail business segment operating results for the first and fourth calendar quarters are generally lower than those for the second and third calendar quarters of each year.
     Wholesale. Our earnings and cash flows from our wholesale business segment are primarily affected by the sales volumes and margins of gasoline, diesel fuel, and lubricants sold. Margins for gasoline, diesel fuel, and lubricant sales are equal to the sales price less cost of sales. Margins are impacted by local supply, demand, and competition.
     Goodwill Impairment Loss. We have a policy to test goodwill for impairment annually or more frequently if indications of impairment exist. Various indications of possible goodwill impairment prompted us to perform goodwill impairment analyses at December 31, 2008 and March 31, 2009. We determined that no such impairment existed as of those dates. Our annual impairment test was performed as of June 30, 2009. The performance of the test is a two-step process. Step 1 of the impairment test involves comparing the fair values of the applicable reporting units with their aggregate carrying values, including goodwill. If the carrying amount of a reporting unit exceeds the reporting unit’s fair value, we perform Step 2 of the goodwill impairment test to determine the amount of impairment loss. Step 2 of the goodwill impairment test involves comparing the implied fair value of the affected reporting unit’s goodwill against the carrying value of that goodwill.
     From the first to the second quarter of 2009, there was a decline in margins within the refining industry as well as a downward change in industry analysts’ forecasts for the remainder of 2009 and 2010. This, along with other negative financial forecasts released by independent refiners during the latter part of the second quarter of 2009, contributed to declines in common stock trading prices within the independent refining sector, including declines in our common stock trading price. As a result, our equity market capitalization fell below the net book value of our assets. Through the filing date of our second quarter 2009 Form 10-Q and through the end of the third quarter 2009, the trading price of our stock has experienced further reductions.
     We completed Step 1 of the impairment test during the second quarter of 2009 and concluded that impairment existed. We finalized our Step 2 analysis during the third quarter of 2009. Consistent with the preliminary Step 2

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analysis completed during the second quarter of 2009, we concluded that all of the goodwill in four of our six reporting units was impaired. The resulting non-cash charge of $299.6 million was reported in our second quarter 2009 results of operations. There were no such impairment charges in the three months ended September 30, 2009 and 2008 and the nine months ended September 30, 2008.
Critical Accounting Policies and Estimates
     We prepare our financial statements in conformity with U.S. generally accepted accounting principles, or GAAP. In order to apply these principles, we must make judgments, assumptions, and estimates based on the best available information at the time. Actual results may differ based on the accuracy of the information utilized and subsequent events, some of which we may have little or no control over. Our critical accounting policies, which are discussed below, could materially affect the amounts recorded in our financial statements. Our critical accounting policies and estimates are discussed in detail under Part I. — Item 7. “Management’s Discussion and Analysis of Financial Condition and Results of Operations” in our 2008 Form 10-K.
     Recent Accounting Pronouncements. For business combinations for which the acquisition date occurs in on or after the first annual reporting period beginning on or after December 15, 2008, Financial Accounting Standards Codification, or FASC, 805, Business Combinations, or FASC 805, provides that contingent assets acquired or liabilities assumed in a business combination be recorded at fair value if the acquisition date fair value can be determined during the measurement period. If not, such items would be recognized at the acquisition date if they meet the recognition requirements of FASC 805. In periods after the acquisition date, an acquirer shall account for contingent assets and liabilities that were not recognized at the acquisition date in accordance with other applicable GAAP, as appropriate. Items not recognized as part of the acquisition but recognized subsequently would be reflected in that subsequent period’s income. These provisions of FASC 805 will have no immediate impact on our financial position or results of operations.
     For fiscal years ending after December 15, 2009, FASC 715, Compensation – Retirement Benefits, provides for a range of additional disclosures designed to give more specific information about pension plans, consisting of (a) how investment allocation decisions are made, including the factors that are pertinent to an understanding of investment policies and strategies, (b) the major categories of plan assets, (c) the inputs and valuation techniques used to measure the fair value of plan assets, (d) the effect of fair value measurements using significant unobservable inputs (Level 3) on changes in plan assets for the period, and (e) significant concentrations of risk within plan assets. These disclosure requirements are effective for the Company beginning January 1, 2010. The principal impact from this standard will be to require us to expand our disclosures regarding its defined benefit and postretirement plans.

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Results of Operations
     The following tables summarize our financial data and key operating statistics for the three and nine months ended September 30, 2009 and 2008. The following data should be read in conjunction with our Condensed Consolidated Financial Statements and the notes thereto, included elsewhere in this report.
Consolidated
     The following tables set forth our summary of historical financial and operating data for the periods indicated:
                                 
    Three Months Ended     Nine Months Ended  
    September 30,     September 30,  
    2009     2008     2009     2008  
            (In thousands, except per share data)          
Statement of Operations Data:
                               
Net sales
  $ 1,896,273     $ 3,165,308     $ 4,848,016     $ 9,068,842  
Operating costs and expenses:
                               
Cost of products sold (exclusive of depreciation and amortization)
    1,698,673       2,790,475       4,102,359       8,297,385  
Direct operating expenses (exclusive of depreciation and amortization)
    116,717       133,206       374,195       399,503  
Selling, general and administrative expenses
    23,725       32,449       85,903       90,000  
Goodwill impairment loss
                299,552        
Maintenance turnaround expense
    1,031       528       4,353       1,738  
Depreciation and amortization
    34,725       29,218       109,382       82,567  
 
                       
Total operating costs and expenses
    1,874,871       2,985,876       4,975,744       8,871,193  
 
                       
Operating income (loss)
    21,402       179,432       (127,728 )     197,649  
Other income (expense):
                               
Interest income
    17       478       197       1,430  
Interest expense
    (33,024 )     (31,153 )     (88,047 )     (69,838 )
Amortization of loan fees
    (1,795 )     (1,553 )     (4,832 )     (3,234 )
Write-off of unamortized loan fees
                (9,047 )     (10,890 )
Gain (loss) from derivative activities
    (726 )     6,022       (13,251 )     (7,826 )
Other income (expense)
    (39 )     422       4,594       1,356  
 
                       
 
                           
Income (loss) before income taxes
    (14,165 )     153,648       (238,114 )     108,647  
Provision for income taxes
    9,383       (44,411 )     (15,057 )     (31,621 )
 
                       
Net income (loss)
  $ (4,782 )   $ 109,237     $ (253,171 )   $ 77,026  
 
                       
 
                               
Basic earnings (loss) per share
  $ (0.05 )   $ 1.60     $ (3.29 )   $ 1.13  
Dilutive earnings (loss) per share
  $ (0.05 )   $ 1.60     $ (3.29 )   $ 1.13  
Weighted average basic shares outstanding
    87,973       67,760       76,191       67,696  
Weighted average dilutive shares outstanding
    87,973       67,760       76,191       67,752  
Cash dividends declared per share
  $     $     $     $ 0.06  
Cash Flow Data:
                               
Net cash provided by (used in):
                               
Operating activities
  $ 28,018     $ 133,859     $ 148,553     $ 170,110  
Investing activities
    (24,026 )     (39,135 )     (93,367 )     (155,702 )
Financing activities
    (5,408 )     (41,118 )     (69,964 )     (131,478 )
Other Data:
                               
Adjusted EBITDA (1)
  $ 44,714     $ 216,100     $ 216,094     $ 276,914  
Capital expenditures
    24,034       39,368       93,762       156,160  
Balance Sheet Data (end of period):
                               
Cash and cash equivalents
                  $ 65,039     $ 172,495  
Working capital
                    316,166       511,159  
Total assets
                    2,918,468       3,474,801  
Total debt
                    1,067,025       1,483,750  
Stockholders’ equity
                    783,462       834,539  

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(1)   Adjusted EBITDA represents earnings before interest expense, income tax expense, amortization of loan fees, depreciation, amortization, maintenance turnaround expense, LCM inventory reserve adjustment and goodwill impairment loss. However, Adjusted EBITDA is not a recognized measurement under GAAP. Our management believes that the presentation of Adjusted EBITDA is useful to investors because it is frequently used by securities analysts, investors and other interested parties in the evaluation of companies in our industry. In addition, our management believes that Adjusted EBITDA is useful in evaluating our operating performance compared to that of other companies in our industry because the calculation of Adjusted EBITDA generally eliminates the effects of financings, income taxes, the accounting effects of significant turnaround activities (which many of our competitors capitalize and thereby exclude from their measures of EBITDA), acquisitions, and certain non-cash charges, items that may vary for different companies for reasons unrelated to overall operating performance.
    Adjusted EBITDA has limitations as an analytical tool, and you should not consider it in isolation, or as a substitute for analysis of our results as reported under GAAP. Some of these limitations are:
    Adjusted EBITDA does not reflect our cash expenditures or future requirements for significant turnaround activities, capital expenditures, or contractual commitments;
    Adjusted EBITDA does not reflect the interest expense or the cash requirements necessary to service interest or principal payments on our debt;
    Adjusted EBITDA does not reflect changes in, or cash requirements for, our working capital needs; and
    our calculation of Adjusted EBITDA may differ from the Adjusted EBITDA calculations of other companies in our industry, thereby limiting its usefulness as a comparative measure.
    Because of these limitations, Adjusted EBITDA should not be considered a measure of discretionary cash available to us to invest in the growth of our business. We compensate for these limitations by relying primarily on our GAAP results and using Adjusted EBITDA only supplementally. The following table reconciles net income (loss) to Adjusted EBITDA for the periods presented:
                                 
    Three Months Ended     Nine Months Ended  
    September 30,     September 30,  
    2009     2008     2009     2008  
            (In thousands)          
Net income (loss)
  $ (4,782 )   $ 109,237     $ (253,171 )   $ 77,026  
Interest expense
    33,024       31,153       88,047       69,838  
Provision for income taxes
    (9,383 )     44,411       15,057       31,621  
Depreciation and amortization
    34,725       29,218       109,382       82,567  
Amortization of loan fees
    1,795       1,553       4,832       3,234  
Write-off of unamortized loan fees
                9,047       10,890  
Maintenance turnaround expense
    1,031       528       4,353       1,738  
Net change in LCM reserve
    (11,696 )           (61,005 )      
Non-cash goodwill impairment loss
                299,552        
 
                       
Adjusted EBITDA
  $ 44,714     $ 216,100     $ 216,094     $ 276,914  
 
                       
Three Months Ended September 30, 2009 Compared to the Three Months Ended September 30, 2008
     Net Sales. Net sales primarily consist of gross sales of refined products, lubricants and merchandise, net of customer rebates or discounts and excise taxes. Net sales for the three months ended September 30, 2009, were $1,896.3 million compared to $3,165.3 million for the three months ended September 30, 2008, a decrease of $1,269.0 million, or 40.1%. This decrease was primarily the result of decreases from our refining group ($1,255.6 million), our wholesale group ($233.7 million) and our retail group ($69.3 million). Net sales were reduced by $583.7 million and $873.3 million for the three months ended September 30, 2009 and 2008, respectively, to account for intercompany transactions that have been eliminated in consolidation.

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     Cost of Products Sold (exclusive of depreciation and amortization). Cost of products sold primarily includes cost of crude oil, other feedstocks and blendstocks, purchased refined products, lubricants and merchandise for resale, transportation costs, and distribution costs. Cost of products sold was $1,698.7 million for the three months ended September 30, 2009, compared to $2,790.5 million for the three months ended September 30, 2008, a decrease of $1,091.8 million, or 39.1%. This decrease was primarily the result of decreases from our refining group ($1,085.8 million), our wholesale group ($223.5 million) and our retail group ($70.3 million). Cost of products sold was reduced by $582.3 million and $870.2 million for the three months ended September 30, 2009 and 2008, respectively, to account for intercompany transactions that have been eliminated in consolidation.
     Direct Operating Expenses (exclusive of depreciation and amortization). Direct operating expenses include direct costs of labor, maintenance materials and services, transportation expenses, chemicals and catalysts, natural gas, utilities, insurance expense, property taxes, and other direct operating expenses. Direct operating expenses were $116.7 million for the three months ended September 30, 2009, compared to $133.2 million for the three months ended September 30, 2008, a decrease of $16.5 million, or 12.4%. This decrease was primarily the result of decreases from our refining group ($14.3 million) and our wholesale group ($4.0 million). Direct operating expenses were reduced by $1.3 million and $3.0 million for the three months ended September 30, 2009 and 2008, respectively, to account for intercompany transactions that have been eliminated in consolidation.
     Selling, General and Administrative Expenses. Selling, general and administrative expenses consist primarily of corporate overhead, marketing expenses, public company costs, and stock-based compensation. Selling, general and administrative expenses were $23.7 million for the three months ended September 30, 2009, compared to $32.4 million for the three months ended September 30, 2008, a decrease of $8.7 million, or 26.9%. This decrease was primarily the result of decreases from our corporate staff operations ($5.0 million), our refining group ($2.8 million) and our wholesale group ($1.1 million). These decreases were partially offset by increases from our retail group ($0.2 million).
     Maintenance Turnaround Expense. Maintenance turnaround expense includes major maintenance and repairs generally performed every four years, depending on the processing units involved. During the quarter ended September 30, 2009, we incurred costs of $0.9 million in anticipation of the turnaround currently scheduled for the first quarter of 2010 at the El Paso refinery and $0.1 million in anticipation for the turnaround currently scheduled for the fall of 2010 at the Yorktown refinery. During the quarter ended September 30, 2008, we incurred costs of $0.5 million in anticipation of the turnaround performed in the fourth quarter of 2008 at the north side of the El Paso refinery.
     Depreciation and Amortization. Depreciation and amortization for the three months ended September 30, 2009, was $34.7 million compared to $29.2 million for the three months ended September 30, 2008, an increase of $5.5 million. This increase was primarily due to increases from our refining group ($5.4 million) and our retail group ($0.2 million) due to the completion of various capital projects in the fourth quarter of 2008 and the first nine months of 2009, that are now being depreciated.
     Operating Income (Loss). Operating income was $21.4 million for the three months ended September 30, 2009, compared to an operating income of $179.4 million for the three months ended September 30, 2008, a decrease of $158.0 million. This decrease was attributable primarily to decreased fuel and lubricant gross margins in the third quarter of 2009 compared to the third quarter of 2008, and increased depreciation and amortization expense.
     Interest Income. Interest income for the three months ended September 30, 2009 and 2008, was less than $0.1 million and $0.5 million, respectively. The decrease was primarily attributable to decreased balances of cash available for investment and lower rates of return on cash invested.
     Interest Expense. Interest expense for the three months ended September 30, 2009 and 2008, was $33.0 million (net of capitalized interest of $0.5 million) and $31.2 million (net of capitalized interest of $2.3 million), respectively. The increase was due to increased interest rates on our long-term debt and the amortization of the original issuance discount on our Senior Secured Notes. The average interest rates on our long-term debt, net of amortization of original issuance discount, for the third quarter of 2009 and 2008 were 9.17% and 7.69%, respectively. This increase was partially offset by a decrease in the average outstanding debt.

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     Amortization of Loan Fees. Amortization of loan fees were $1.8 million and $1.6 million for the three months ended September 30, 2009 and 2008, respectively. The increase was primarily the result of additional deferred financing fees incurred in 2009 due to the new debt and stock offerings. This increase was partially offset by the write-off of unamortized loan fees related to the reduction of the balance in our term loan.
     Gain (Loss) from Derivative Activities. The loss from derivative activities was $0.7 million for the three months ended September 30, 2009, compared to a gain from derivative activities of $6.0 million for the three months ended September 30, 2008, respectively. The difference between the two periods was primarily attributable to fluctuations in market prices related to the derivative transactions that were either settled or marked to market during each respective period.
     Provision for Income Taxes. We recorded income tax benefit of $9.4 million for the quarter ended September 30, 2009, using an estimated effective tax rate of 66%, as compared to the Federal statutory rate of 35%. The effective tax rate was higher primarily to adjust the annualized rate based on estimated annual taxable income. We recorded income tax expense of $44.4 million for the quarter ended September 30, 2008, using an estimated effective tax rate of 28.9%.
     Net Income (Loss). We reported net loss of $4.8 million for the three months ended September 30, 2009, representing $0.05 net loss per share for the third quarter of 2009 on weighted average dilutive shares outstanding of 88.0 million. For the third quarter of 2008, we reported a net income of $109.2 million representing $1.60 net earnings per share on weighted average dilutive shares outstanding of 67.8 million.
Nine Months Ended September 30, 2009 Compared to the Nine Months Ended September 30, 2008
     Net Sales. Net sales primarily consist of gross sales of refined products, lubricants and merchandise, net of customer rebates or discount and excise taxes. Net sales for the nine months ended September 30, 2009 were $4,848.0 million, compared to $9,068.8 million for the nine months ended September 30, 2008, a decrease of $4,220.8 million, or 46.5%. This decrease was primarily the result of decreases from our refining group ($4,259.0 million), our wholesale group ($705.7 million) and our retail group ($208.4 million). Net sales were reduced by $1,450.6 million and $2,402.9 million for the nine months ended September 30, 2009 and 2008, respectively, to account for intercompany transactions that have been eliminated in consolidation.
     Cost of Products Sold (exclusive of depreciation and amortization). Cost of products sold primarily includes cost of crude oil, other feedstocks and blendstocks, purchased refined products, lubricants and merchandise for resale, transportation costs, and distribution costs. Cost of products sold was $4,102.4 million for the nine months ended September 30, 2009, compared to $8,297.4 million for the nine months ended September 30, 2008, a decrease of $4,195.0 million, or 50.6%. This decrease was primarily the result of decreases from our refining group ($4,237.0 million), our wholesale group ($686.2 million) and our retail group ($213.9 million). Cost of products sold was reduced by $1,446.3 million and $2,388.4 million for the nine months ended September 30, 2009 and 2008, respectively, to account for intercompany transactions that have been eliminated in consolidation.
     Direct Operating Expenses (exclusive of depreciation and amortization). Direct operating expenses include direct costs of labor, maintenance materials and services, transportation expenses, chemicals and catalysts, natural gas, utilities, insurance expense, property taxes, and other direct operating expenses. Direct operating expenses were $374.2 million for the nine months ended September 30, 2009, compared to $399.5 million for the nine months ended September 30, 2008, a decrease of $25.3 million, or 6.3%. This decrease was primarily the result of decreases from our refining group ($25.5 million) and our wholesale group ($10.0 million). Direct operating expenses were reduced by $4.2 million and $14.5 million for the nine months ended September 30, 2009 and 2008, respectively, to account for intercompany transactions that have been eliminated in consolidation.
     Selling, General and Administrative Expenses. Selling, general and administrative expenses consist primarily of corporate overhead, marketing expenses, public company costs, and stock-based compensation. Selling, general and administrative expenses were $85.9 million for the nine months ended September 30, 2009, compared to $90.0 million for the nine months ended September 30, 2008, a decrease of $4.1 million, or 4.6%. This decrease was primarily the result of decreases from our corporate staff operations ($2.3 million), our wholesale group ($1.8 million) and our refining group ($0.8 million). These decreases were partially offset by increases from our retail group ($0.8 million).

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     Goodwill Impairment Loss. We have a policy to test goodwill for impairment annually or more frequently if indications of impairment exist. As of June 30, 2009, we determined that all of the goodwill in four of our six reporting units was impaired. The total impact of the goodwill impairments for the nine months ended September 30, 2009 was a non-cash charge of $299.6 million. There were no such impairments for the nine months ended September 30, 2008.
     Maintenance Turnaround Expense. Maintenance turnaround expense includes major maintenance and repairs generally performed every four years, depending on the processing units involved. During the nine months ended September 30, 2009, we incurred costs of $2.9 million in a crude unit shutdown and $0.9 million in connection with the planned turnaround in the first quarter of 2010 at the El Paso refinery; and $0.5 million in anticipation of a turnaround currently scheduled for the fall of 2010 at the Yorktown refinery. During the nine months ended September 30, 2008, we incurred costs of $1.7 million in anticipation of the turnaround performed in the fourth quarter of 2008 at the north side of the El Paso refinery.
     Depreciation and Amortization. Depreciation and amortization for the nine months ended September 30, 2009, was $109.4 million, compared to $82.6 million for the nine months ended September 30, 2008. This increase was primarily due to increases from our refining group ($24.3 million), our corporate staff operations ($1.3 million) and our retail group ($1.1 million) due to the completion of various capital projects in the last half of 2008 and the first half of 2009, that are now being depreciated.
     Operating Income (Loss). Operating loss was $127.7 million for the nine months ended September 30, 2009, compared to operating income of $197.6 million for the nine months ended September 30, 2008, a decrease of $325.3 million. This decrease was attributable primarily to a goodwill impairment loss, decreased refinery gross margins and increased depreciation and amortization expense. These decreases were partially offset by decreased direct operating expenses and selling, general and administrative expenses.
     Interest Income. Interest income for the nine months ended September 30, 2009 and 2008, was $0.2 million and $1.4 million, respectively. The decrease is primarily attributable to decreased balances of cash for investment and lower rates of return on cash invested.
     Interest Expense. Interest expense for the nine months ended September 30, 2009 and 2008, was $88.0 million (net of capitalized interest of $5.7 million) and $69.8 million (net of capitalized interest of $6.8 million), respectively. The increase was due to increased interest rates on our long-term debt and the amortization of the original issuance discount on our Senior Secured Notes. The average interest rates on our long-term debt, net of amortization of original issuance discount, for the first nine months of 2009 and 2008 were 8.78% and 6.07%, respectively. This increase was partially offset by a decrease in the average outstanding debt.
     Amortization of Loan Fees. Amortization of loan fees were $4.8 million and $3.2 million for the nine months ended September 30, 2009 and 2008, respectively. The increase was primarily the result of additional deferred financing fees incurred in 2009 due to the new debt and stock offerings. This increase was partially offset by the write-off of unamortized loan fees related to the reduction of the balance in our term loan credit agreement.
     Write-off of Unamortized Loan Fees. In June 2009, we made principal payments on our term loan credit agreement of $904.2 million primarily from the net proceeds of the debt and common stock offerings. As a result of this transaction, we wrote-off $9.0 million related to the portion of deferred financing costs associated with this payment. On June 30, 2008, we entered into an amendment to our term loan credit agreement discussed above. As a result of such amendment, we recorded an expense of $10.9 million related to the write-off of deferred financing costs incurred in May 2007.
     Gain (Loss) from Derivative Activities. The net loss from derivative activities was $13.3 million for the nine months ended September 30, 2009, compared to a $7.8 million net loss for the nine months ended September 30, 2008. The difference between the two periods primarily was attributable to fluctuations in market prices related to the derivative transactions that were either settled or marked to market during each respective period.
     Provision for Income Taxes. We recorded income tax expense of $15.1 million for the nine months ended September 30, 2009, using an estimated effective tax rate of 25%, before goodwill impairment loss, as compared to

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the Federal statutory rate of 35%. The effective tax rate was lower than the statutory rate due to the federal income tax credit available to small business refiners related to the production of ultra low sulfur diesel fuel. We have treated the non-cash goodwill impairment loss discretely, as it is not deductible for income tax purposes, and is excluded from the tax rate. We recorded income tax expense of $31.6 million for the nine months ended September 30, 2008, using an estimated effective tax rate of 29.1%, as compared to the Federal statutory rate of 35%.
     Net Income (Loss). We reported a net loss of $253.2 million for the nine months ended September 30, 2009, representing $3.29 net loss per share for the first nine months of 2009 on weighted average dilutive shares outstanding of 76.2 million. For the first nine months of 2008, we reported net income of $77.0 million representing $1.13 net income per share on weighted average dilutive shares outstanding of 67.8 million.
Refining Segment
     The following table presents the segment financial data for our refining group, including other revenues and expenses not specific to a particular refinery:
                                 
    Three Months Ended     Nine Months Ended  
    September 30,     September 30,  
    2009     2008     2009     2008  
    (In thousands, except per barrel data)  
Net sales (including intersegment sales)
  $ 1,834,130     $ 3,089,723     $ 4,645,709     $ 8,904,717  
Operating costs and expenses:
                               
Cost of products sold (exclusive of depreciation and amortization) (1)
    1,684,725       2,770,540       4,033,681       8,270,707  
Direct operating expenses (exclusive of depreciation and amortization)
    88,042       102,278       288,677       314,162  
Selling, general and administrative expenses
    8,470       11,266       28,247       29,019  
Goodwill impairment loss
                230,712        
Maintenance turnaround expense
    1,031       528       4,353       1,738  
Depreciation and amortization
    29,686       24,330       94,162       69,913  
 
                       
Total operating costs and expenses
    1,811,954       2,908,942       4,679,832       8,685,539  
 
                       
Operating income (loss)
  $ 22,176     $ 180,781     $ (34,123 )   $ 219,178  
 
                       
 
                               
Key Operating Statistics:
                               
Total sales volume (bpd) (2)
    265,544       256,488       256,830       263,521  
Total refinery production (bpd)
    220,453       229,412       219,435       232,608  
Total refinery throughput (bpd) (3)
    223,129       230,814       221,232       234,207  
Per barrel of throughput:
                               
Refinery gross margin (1)(4)
  $ 7.28     $ 15.03     $ 10.13     $ 9.88  
Gross profit (4)
    5.83       13.89       8.57       8.79  
Direct operating expenses (5)
    4.29       4.82       4.78       4.90  
 
(1)   Includes a net change in the LCM reserve to value our Yorktown inventories to net realizable market values, which decreased cost of products sold and increased refinery gross margin by $11.7 million and $61.0 million for the three and nine months ended September 30, 2009, respectively.
 
(2)   Includes sales of refined products sourced from our refinery production as well as refined products purchased from third parties.
 
(3)   Total refinery throughput includes crude oil, other feedstocks, and blendstocks.
 
(4)   Refinery gross margin is a per barrel measurement calculated by dividing the difference between net sales and cost of products sold by our refineries’ total throughput volumes for the respective periods presented. We have experienced gains or losses from derivative activities that are not taken into account in calculating refinery gross

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    margin. Cost of products sold does not include any depreciation or amortization. Refinery gross margin is a non-GAAP performance measure that we believe is important to investors in evaluating our refinery performance as a general indication of the amount above our cost of products that we are able to sell refined products. Each of the components used in this calculation (net sales and cost of products sold) can be reconciled directly to our statement of operations. Our calculation of refinery gross margin may differ from similar calculations of other companies in our industry, thereby limiting its usefulness as a comparative measure.
    The following tables reconcile gross profit to refinery gross margin for the periods presented:
                                 
    Three Months Ended     Nine Months Ended  
    September 30,     September 30,  
    2009     2008     2009     2008  
    (In thousands, except per barrel data)  
Net sales
  $ 1,834,130     $ 3,089,723     $ 4,645,709     $ 8,904,717  
Cost of products sold (exclusive of depreciation and amortization)
    1,684,725       2,770,540       4,033,681       8,270,707  
Depreciation and amortization
    29,686       24,330       94,162       69,913  
 
                       
Gross profit
    119,719       294,853       517,866       564,097  
Plus depreciation and amortization
    29,686       24,330       94,162       69,913  
 
                       
Refinery gross margin
  $ 149,405     $ 319,183     $ 612,028     $ 634,010  
 
                       
 
                               
Refinery gross margin per refinery throughput barrel
  $ 7.28     $ 15.03     $ 10.13     $ 9.88  
 
                       
Gross profit per refinery throughput barrel
  $ 5.83     $ 13.89     $ 8.57     $ 8.79  
 
                       
 
(5)   Refinery direct operating expenses per throughput barrel is calculated by dividing direct operating expenses by total throughput volumes for the respective periods presented. Direct operating expenses do not include any depreciation or amortization.

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     The following tables set forth our summary refining throughput and production data for the periods presented below:
                                 
All Refineries            
    Three Months Ended   Nine Months Ended
    September 30,   September 30,
    2009   2008   2009   2008
Key Operating Statistics:
                               
Refinery product yields (bpd)
                               
Gasoline
    115,536       112,733       114,771       117,522  
Diesel and jet fuel
    83,954       93,420       82,538       92,268  
Residuum
    5,458       6,255       5,672       5,887  
Other
    9,778       9,579       9,956       10,139  
 
                               
Liquid products
    214,726       221,987       212,937       225,816  
By-products (coke)
    5,727       7,425       6,498       6,792  
 
                               
Total refinery production (bpd)
    220,453       229,412       219,435       232,608  
 
                               
 
                               
Refinery throughput (bpd)
                               
Sweet crude oil
    128,535       142,822       127,944       152,668  
Sour or heavy crude oil
    73,031       69,210       69,569       62,016  
Other feedstocks/blendstocks
    21,563       18,782       23,719       19,523  
 
                               
Total refinery throughput (bpd)
    223,129       230,814       221,232       234,207  
 
                               
                                 
El Paso Refinery                
    Three Months Ended     Nine Months Ended  
    September 30,     September 30,  
    2009     2008     2009     2008  
Key Operating Statistics:
                               
Refinery product yields (bpd)
                               
Gasoline
    64,852       64,018       65,737       65,189  
Diesel and jet fuel
    54,236       56,226       50,853       54,894  
Residuum
    5,458       6,255       5,672       5,887  
Other
    3,290       3,615       3,382       3,828  
 
                       
Total refinery production (bpd)
    127,836       130,114       125,644       129,798  
 
                       
 
                               
Refinery throughput (bpd)
                               
Sweet crude oil
    103,122       104,845       102,373       103,768  
Sour crude oil
    19,969       18,487       15,985       17,497  
Other feedstocks/blendstocks
    7,051       9,235       9,431       10,530  
 
                       
Total refinery throughput (bpd)
    130,142       132,567       127,789       131,795  
 
                       
 
                               
Total sales volume (bpd)
    150,823       137,632       143,905       141,988  
Per barrel of throughput:
                               
Refinery gross margin
  $ 8.05     $ 13.03     $ 10.29     $ 9.77  
Direct operating expenses
    3.01       3.82       3.51       3.93  

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Yorktown Refinery                
    Three Months Ended     Nine Months Ended  
    September 30,     September 30,  
    2009     2008     2009     2008  
Key Operating Statistics:
                               
Refinery product yields (bpd)
                               
Gasoline
    31,664       29,919       31,367       31,893  
Diesel and jet fuel
    22,101       28,525       23,982       28,266  
Other
    5,407       4,940       5,490       5,134  
 
                       
Liquid products
    59,172       63,384       60,839       65,293  
By-products (coke)
    5,727       7,425       6,498       6,792  
 
                       
Total refinery production (bpd)
    64,899       70,809       67,337       72,085  
 
                       
 
                               
Refinery throughput (bpd)
                               
Sweet crude oil
          9,813       9       19,603  
Sour or heavy crude oil
    53,062       50,723       53,584       44,519  
Other feedstocks/blendstocks
    11,476       7,946       12,592       6,353  
 
                       
Total refinery throughput (bpd)
    64,538       68,482       66,185       70,475  
 
                       
 
                               
Total sales volume (bpd)
    77,010       79,501       76,048       77,444  
Per barrel of throughput:
                               
Refinery gross margin (1)
  $ 2.67     $ 14.91     $ 7.32     $ 7.95  
Direct operating expenses
    4.98       4.72       5.20       4.64  
 
(1)   Includes a net change in the LCM reserve to value our Yorktown inventories to net realizable market values, which increased refinery gross margin by $1.97 and $3.38 per throughput barrel for the three and nine months ended September 30, 2009, respectively.
                                 
Four Corners Refineries                
    Three Months Ended     Nine Months Ended  
    September 30,     September 30,  
    2009     2008     2009     2008  
Key Operating Statistics:
                               
Refinery product yields (bpd)
                               
Gasoline
    19,020       18,796       17,667       20,440  
Diesel and jet fuel
    7,617       8,669       7,703       9,108  
Other
    1,081       1,024       1,084       1,177  
 
                       
Total refinery production (bpd)
    27,718       28,489       26,454       30,725  
 
                       
 
                               
Refinery throughput (bpd)
                               
Sweet crude oil
    25,413       28,164       25,562       29,297  
Other feedstocks/blendstocks
    3,036       1,601       1,696       2,640  
 
                       
Total refinery throughput (bpd)
    28,449       29,765       27,258       31,937  
 
                       
 
                               
Total sales volume (bpd)
    37,711       39,355       36,877       44,089  
Per barrel of throughput:
                               
Refinery gross margin
  $ 14.04     $ 23.02     $ 16.11     $ 12.68  
Direct operating expenses
    7.64       7.84       8.56       8.15  
Three Months Ended September 30, 2009 Compared to the Three Months Ended September 30, 2008
     Net Sales. Net sales consist primarily of gross sales of refined petroleum products, net of customer rebates, discounts, and excise taxes. Net sales for the three months ended September 30, 2009, were $1,834.1 million, compared to $3,089.7 million for the three months ended September 30, 2008, a decrease of $1,255.6 million, or 40.6%. This decrease was primarily the result of lower sales prices of refined products. The average sales price per

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barrel at our four refineries decreased from $130.94 in the third quarter of 2008, to $75.08 in the third quarter of 2009, a decrease of 42.7%. This decrease was partially offset by an increase in the volume of refined products sold. During the third quarter of 2009, we sold 24.4 million barrels of refined products compared to 23.6 million barrels for the same period in 2008.
     Cost of Products Sold (exclusive of depreciation and amortization). Cost of products sold includes cost of crude oil, other feedstocks and blendstocks, purchased products for resale, transportation costs, and distribution costs. Cost of products sold was $1,684.7 million for the three months ended September 30, 2009, compared to $2,770.5 million for the three months ended September 30, 2008, a decrease of $1,085.8 million, or 39.2%. This decrease was primarily the result of lower crude oil costs. The average cost per barrel decreased from $114.62 in the third quarter of 2008, to $65.96 in the third quarter of 2009, a decrease of 42.5%. Also contributing to this decrease, were decreased purchases of other feedstocks and blendstocks ($83.3 million), decreased third-party purchases ($70.0 million) and an LCM inventory adjustment ($11.7 million). These decreases were partially offset by an increase in the change in our LIFO reserve ($219.3 million). Refinery gross margin per throughput barrel decreased from $15.03 in the third quarter of 2008 to $7.28 in the third quarter of 2009. Narrow heavy and sour crude differentials during the quarter had a negative impact on refinery gross margins at the Yorktown refinery and, to a lesser extent, at the El Paso refinery, Yorktown also experienced lower coking margins than in previous quarters. Gross profit per barrel, based on the closest comparable GAAP measure to refinery gross margin, was $5.83 and $13.89 for the three months ended September 30, 2009 and 2008, respectively.
     Direct Operating Expenses (exclusive of depreciation and amortization). Direct operating expenses include costs associated with the operations of our refineries, such as energy and utility costs, catalyst and chemical costs, routine maintenance, labor, insurance, property taxes, and environmental compliance costs. Direct operating expenses were $88.0 million for the three months ended September 30, 2009, compared to $102.3 million for the three months ended September 30, 2008, a decrease of $14.3 million, or 14.0%. This decrease primarily resulted from decreased natural gas expense ($8.9 million), decreased property taxes ($6.3 million), decreased personnel costs ($1.1 million), decreased facilities leases ($0.6 million), decreased equipment rentals ($0.5 million) and decreased general maintenance costs ($0.5 million). These decreases were partially offset by increased professional and legal fees ($1.2 million).
     Selling, General and Administrative Expenses. Selling, general and administrative expenses consist primarily of overhead and marketing expenses. Selling, general and administrative expenses were $8.5 million for the three months ended September 30, 2009, compared to $11.3 million for the three months ended September 30, 2008, a decrease of $2.8 million, or 24.8%. This decrease primarily resulted from decreased professional and legal fees ($2.9 million) and decreased personnel costs mainly related to incentive compensation ($1.4 million). These decreases were partially offset by increased marketing expenses ($0.9 million) and increased bad debt expense ($0.4 million).
     Maintenance Turnaround Expense. Maintenance turnaround expense includes major maintenance and repairs generally performed every four years, depending on the processing units involved. During the quarter ended September 30, 2009, we incurred costs of $0.9 million in anticipation of the turnaround currently scheduled for the first quarter of 2010 at the El Paso refinery and $0.1 million in anticipation for the turnaround currently scheduled for the fall of 2010 at the Yorktown refinery. During the quarter ended September 30, 2008, we incurred costs of $0.5 million in anticipation of the turnaround performed in the fourth quarter of 2008 at the north side of the El Paso refinery.
     Depreciation and Amortization. Depreciation and amortization for the three months ended September 30, 2009, was $29.7 million, compared to $24.3 million for the three months ended September 30, 2008, an increase of $5.4 million, or 22.2%. This increase was primarily due to the completion of the FCC hydrotreater at the El Paso refinery, the ULSD unit electrical infrastructure at the Yorktown refinery, and various other capital projects at our four refineries.
     Operating Income. We reported operating income of $22.2 million for the three months ended September 30, 2009, compared to $180.8 million of operating income for the three months ended September 30, 2008, a decrease of $158.6 million. This decrease was attributable primarily to decreased refinery gross margins in the third quarter of 2009 compared to the third quarter of 2008.

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Nine Months Ended September 30, 2009 Compared to the Nine Months Ended September 30, 2008
     Net Sales. Net sales consist primarily of gross sales of refined petroleum products, net of customer rebates, discounts, and excise taxes. Net sales for the nine months ended September 30, 2009, were $4,645.7 million, compared to $8,904.7 million for the nine months ended September 30, 2008, a decrease of $4,259.0 million, or 47.8%. This decrease was primarily the result of lower sales prices and volumes sold of refined products. The average sales price per barrel at our four refineries decreased from $123.33 in the first nine months of 2008, to $66.26 in the first nine months of 2009, a decrease of 46.3%. During the first nine months of 2009, we sold 70.1 million barrels of refined products compared to 72.2 million barrels for the same period in 2008.
     Cost of Products Sold (exclusive of depreciation and amortization). Cost of products sold includes cost of crude oil, other feedstocks and blendstocks, purchased products for resale, transportation costs, and distribution costs. Cost of products sold was $4,033.7 million for the nine months ended September 30, 2009, compared to $8,270.7 million for the nine months ended September 30, 2008, a decrease of $4,237.0 million, or 51.2%. This decrease was primarily the result of lower crude oil costs. The average cost per barrel decreased from $110.22 in the first nine months of 2008, to $53.51 in the first nine months of 2009, a decrease of 51.5%. During the first nine months of 2009, we purchased 53.3 million barrels of crude oil compared to 46.2 million barrels for the same period in 2008. Also contributing to this decrease were decreased third-party purchases ($503.2 million), decreased purchases of other feedstocks and blendstocks ($244.4 million) and an LCM inventory adjustment ($61.0 million). These decreases were partially offset by an increase in the change in our LIFO reserve ($96.7 million). Refinery gross margin per throughput barrel increased from $9.88 in the first nine months of 2008 to $10.13 in the first nine months of 2009. Narrow heavy and sour crude differentials had a negative impact on refinery gross margins at the Yorktown refinery and, to a lesser extent, at the El Paso refinery. The Yorktown refinery has also experienced declining coking margins. Gross profit per barrel, based on the closest comparable GAAP measure to refinery gross margin, was $8.57 and $8.79 for the nine months ended September 30, 2009 and 2008, respectively.
     Direct Operating Expenses (exclusive of depreciation and amortization). Direct operating expenses include costs associated with the operations of our refineries, such as energy and utility costs, catalyst and chemical costs, routine maintenance, labor, insurance, property taxes, and environmental compliance costs. Direct operating expenses were $288.7 million for the nine months ended September 30, 2009, compared to $314.2 million for the nine months ended September 30, 2008, a decrease of $25.5 million, or 8.1%. This decrease primarily resulted from decreased natural gas expense ($19.7 million), decreased general maintenance costs ($10.8 million), decreased property taxes ($5.7 million), decreased insurance expense ($2.2 million), decreased outside support services ($2.3 million), decreased environmental expenses ($1.6 million), decreased equipment rentals ($1.2 million), and decreased facilities leases ($1.0 million). These decreases were partially offset by increased chemicals and catalysts ($5.5 million), increased electricity expense ($5.3 million), increased personnel costs ($5.0 million) and increased professional and legal fees ($1.6 million).
     Selling, General and Administrative Expenses. Selling, general and administrative expenses consist primarily of overhead and marketing expenses. Selling, general and administrative expenses were $28.2 million for the nine months ended September 30, 2009, compared to $29.0 million for the nine months ended September 30, 2008, a decrease of $0.8 million, or 2.8%. This decrease primarily resulted from decreased professional and legal fees ($5.5 million). This decrease was partially offset by increased marketing expenses ($1.9 million), increased environmental penalties ($1.5 million) and increased bad debt expense ($1.4 million).
     Goodwill Impairment Loss. We have a policy to test goodwill for impairment annually or more frequently if indications of impairment exist. As of June 30, 2009, we determined that all of the goodwill in the two reporting units of our refining group was impaired. The total impact of the goodwill impairments for the nine months ended September 30, 2009 was a non-cash charge of $230.7 million. There were no such impairments for the nine months ended September 30, 2008.
     Maintenance Turnaround Expense. Maintenance turnaround expense includes major maintenance and repairs generally performed every four years, depending on the processing units involved. During the nine months ended September 30, 2009, we incurred costs of $2.9 million for a crude unit shutdown and $0.9 million in connection with the planned turnaround in the first quarter of 2010 at the El Paso refinery; and $0.5 million in anticipation of a turnaround currently scheduled for the fall of 2010 at the Yorktown refinery. During the nine months ended September 30, 2008, we incurred costs of $1.7 million in anticipation of the turnaround performed in the fourth quarter of 2008 at the north side of the El Paso refinery.

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     Depreciation and Amortization. Depreciation and amortization for the nine months ended September 30, 2009, was $94.2 million, compared to $69.9 million for the nine months ended September 30, 2008, an increase of $24.3 million, or 34.8%. This increase was primarily due to the completion of the FCC hydrotreater, the sour water stripper and a new laboratory at the El Paso refinery; the gasoline desulfurization project at the Yorktown refinery; and various other capital projects at our four refineries.
     Operating Income (Loss). We reported operating loss of $34.1 million for the nine months ended September 30, 2009, compared to $219.2 million of operating income for the nine months ended September 30, 2008, a decrease of $253.3 million. This decrease was primarily due to a goodwill impairment loss, increased depreciation and amortization expense and decreased refinery gross margins in the first nine months of 2009 compared to the same period in 2008. These decreases were partially offset by decreased direct operating expenses.
Retail Segment
                                 
    Three Months Ended     Nine Months Ended  
    September 30,     September 30,  
    2009     2008     2009     2008  
            (In thousands, except per gallon data)          
Statement of Operations Data:
                               
Net sales (including intersegment sales)
  $ 176,708     $ 245,951     $ 466,445     $ 674,805  
Operating costs and expenses:
                               
Cost of products sold (exclusive of depreciation and amortization)
    148,723       219,047       392,330       606,163  
Direct operating expenses (exclusive of depreciation and amortization)
    17,273       17,146       49,598       49,687  
Selling, general and administrative expenses
    1,545       1,271       4,762       3,962  
Goodwill impairment loss
                27,610        
Depreciation and amortization
    2,415       2,172       7,298       6,182  
 
                       
Total operating costs and expenses
    169,956       239,636       481,598       665,994  
 
                       
Operating income (loss)
  $ 6,752     $ 6,315     $ (15,153 )   $ 8,811  
 
                       
 
                               
Operating Data:
                               
Fuel gallons sold (in thousands)
    53,708       53,606       155,216       158,079  
Fuel margin per gallon (1)
  $ 0.23     $ 0.22     $ 0.19     $ 0.16  
Merchandise sales (in thousands)
  $ 51,129     $ 50,141     $ 144,339     $ 140,176  
Merchandise margin (2)
    28.4 %     27.4 %     28.4 %     27.6 %
Operating retail outlets at period end
                    152       154  

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    Three Months Ended     Nine Months Ended  
    September 30,     September 30,  
    2009     2008     2009     2008  
            (In thousands, except per gallon data)          
Net Sales:
                               
Fuel sales
  $ 139,028     $ 207,519     $ 357,542     $ 566,862  
Excise taxes included in fuel revenues
    (19,405 )     (17,567 )     (53,649 )     (50,901 )
Merchandise sales
    51,129       50,141       144,339       140,176  
Other sales
    5,956       5,858       18,213       18,668  
 
                       
Net sales
  $ 176,708     $ 245,951     $ 466,445     $ 674,805  
 
                       
 
                               
Cost of Products Sold:
                               
Fuel cost of products sold
  $ 126,841     $ 195,635     $ 328,384     $ 540,941  
Excise taxes included in fuel cost of products sold
    (19,405 )     (17,567 )     (53,649 )     (50,901 )
Merchandise cost of products sold
    36,622       36,421       103,400       101,468  
Other cost of products sold
    4,665       4,558       14,195       14,655  
 
                       
Cost of products sold
  $ 148,723     $ 219,047     $ 392,330     $ 606,163  
 
                       
 
                               
Fuel margin per gallon (1)
  $ 0.23     $ 0.22     $ 0.19     $ 0.16  
 
                       
 
(1)   Fuel margin per gallon is a measurement calculated by dividing the difference between fuel sales and cost of fuel sales for our retail segment by the number of gallons sold.
 
(2)   Merchandise margin is a measurement calculated by dividing the difference between merchandise sales and merchandise cost of products sold by merchandise sales. Merchandise margin is a measure frequently used in the convenience store industry to measure operating results related to merchandise sales.
Three Months Ended September 30, 2009 Compared to the Three Months Ended September 30, 2008
     Net Sales. Net sales consist primarily of gross sales of gasoline and diesel fuel net of excise taxes, general merchandise, and beverage and food products. Net sales for the three months ended September 30, 2009, were $176.7 million, compared to $246.0 million for the three months ended September 30, 2008, a decrease of $69.3 million, or 28.2%. This decrease was primarily due to a decrease in the sales price of gasoline and diesel fuel. The average sales price per gallon decreased from $3.87 in the third quarter of 2008 to $2.59 in the third quarter of 2009. This decrease was partially offset by increased merchandise sales.
     Cost of Products Sold (exclusive of depreciation and amortization). Cost of products sold includes costs of gasoline and diesel fuel net of excise taxes, general merchandise, and beverage and food products. Cost of products sold was $148.7 million for the three months ended September 30, 2009, compared to $219.0 million for the three months ended September 30, 2008, a decrease of $70.3 million, or 32.1%. This decrease was primarily due to decreased costs of gasoline and diesel fuel. Average fuel cost per gallon decreased from $3.65 in the third quarter of 2008 to $2.36 in the third quarter of 2009.
     Direct Operating Expenses (exclusive of depreciation and amortization). Direct operating expenses include costs associated with the operations of our retail division such as labor, repairs and maintenance, rentals and leases, insurance, property taxes, and environmental compliance costs. Direct operating expenses were $17.3 million for the three months ended September 30, 2009, compared to $17.1 million for the three months ended September 30, 2008, an increase of $0.2 million, or 1.2%.
     Selling, General and Administrative Expenses. Selling, general and administrative expenses consist primarily of overhead and marketing expenses. Selling, general and administrative expenses were $1.5 million for the three months ended September 30, 2009, compared to $1.3 million for the three months ended September 30, 2008, an increase of $0.2 million, or 15.4%. This increase was primarily due to increased personnel costs ($0.2 million).

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     Depreciation and Amortization. Depreciation and amortization for the three months ended September 30, 2009, was $2.4 million, compared to $2.2 million for the three months ended September 30, 2008, an increase of $0.2 million, or 9.1%.
     Operating Income (Loss). Operating income for the three months ended September 30, 2009, was $6.8 million, compared to operating income of $6.3 million for the three months ended September 30, 2008, an increase of $0.5 million. This increase was primarily due to higher merchandise and fuel margins in the third quarter of 2009 compared to the same period in 2008. These increases were partially offset by increased selling, general and administrative expenses and increased depreciation and amortization.
Nine Months Ended September 30, 2009 Compared to the Nine Months Ended September 30, 2008
     Net Sales. Net sales consist primarily of gross sales of gasoline and diesel fuel net of excise taxes, general merchandise, and beverage and food products. Net sales for the nine months ended September 30, 2009, were $466.4 million, compared to $674.8 million for the nine months ended September 30, 2008, a decrease of $208.4 million, or 30.9%. This decrease was primarily due to a decrease in the sales price of gasoline and diesel fuel. The average sales price per gallon decreased from $3.59 in the nine months ended September 30, 2008, to $2.30 for the same period in 2009. This decrease was partially offset by increased merchandise sales.
     Cost of Products Sold (exclusive of depreciation and amortization). Cost of products sold includes costs of gasoline and diesel fuel net of excise taxes, general merchandise, and beverage and food products. Cost of products sold was $392.3 million for the nine months ended September 30, 2009, compared to $606.2 million for the nine months ended September 30, 2008, a decrease of $213.9 million, or 35.3%. This decrease was primarily due to decreased costs of gasoline and diesel fuel. Average fuel cost per gallon decreased from $3.42 in the first nine months of 2008, to $2.12 in the first nine months of 2009.
     Direct Operating Expenses (exclusive of depreciation and amortization). Direct operating expenses include costs associated with the operations of our retail division such as labor, repairs and maintenance, rentals and leases, insurance, property taxes, and environmental compliance costs. Direct operating expenses were $49.6 million for the nine months ended September 30, 2009, compared to $49.7 million for the nine months ended September 30, 2008, a decrease of $0.1 million, or 0.2%.
     Selling, General and Administrative Expenses. Selling, general and administrative expenses consist primarily of overhead and marketing expenses. Selling, general and administrative expenses were $4.8 million for the nine months ended September 30, 2009, compared to $4.0 million for the nine months ended September 30, 2008, an increase of $0.8 million, or 20.0%. This increase was primarily due to increased personnel costs ($0.8 million).
     Goodwill Impairment Loss. We have a policy to test goodwill for impairment annually or more frequently if indications of impairment exist. As of June 30, 2009, we determined that all of the goodwill in the reporting unit of our retail group was impaired. The total impact of the goodwill impairments for the nine months ended September 30, 2009 was a non-cash charge of $27.6 million. There were no such impairments for the nine months ended September 30, 2008.
     Depreciation and Amortization. Depreciation and amortization for the nine months ended September 30, 2009, was $7.3 million, compared to $6.2 million for the nine months ended September 30, 2008, an increase of $1.1 million, or 17.7%.
     Operating Income (Loss). Operating loss for the nine months ended September 30, 2009, was $15.2 million, compared to operating income of $8.8 million for the nine months ended September 30, 2008, a decrease of $24.0 million. This decrease was primarily due to a goodwill impairment loss; increased depreciation and amortization; and increased selling, general and administrative expenses. These decreases were partially offset by higher fuel and merchandise margins for the nine months ended September 30, 2009 compared to the same period in 2008.

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Wholesale Segment
                                 
    Three Months Ended     Nine Months Ended  
    September 30,     September 30,  
    2009     2008     2009     2008  
            (In thousands, except per gallon data)          
Statement of Operations Data:
                               
Net sales (including intersegment)
  $ 469,142     $ 702,755     $ 1,186,466     $ 1,892,176  
Operating costs and expenses:
                               
Cost of products sold (exclusive of depreciation and amortization)
    447,543       670,971       1,122,719       1,808,869  
Direct operating expenses (exclusive of depreciation and amortization)
    12,791       16,840       40,153       50,156  
Selling, general and administrative expenses
    3,734       4,826       12,634       14,395  
Goodwill impairment loss
                41,230        
Depreciation and amortization
    1,394       1,310       4,205       4,074  
 
                       
Total operating costs and expenses
    465,462       693,947       1,220,941       1,877,494  
 
                       
Operating income (loss)
  $ 3,680     $ 8,808     $ (34,475 )   $ 14,682  
 
                       
 
                               
Operating Data:
                               
Fuel gallons sold (in thousands)
    213,590       187,047       611,514       534,334  
Fuel margin per gallon (1)
  $ 0.07     $ 0.09     $ 0.07     $ 0.08  
Lubricant sales (in thousands)
  $ 26,665     $ 43,784     $ 86,801     $ 123,716  
Lubricant margin (2)
    10.0 %     15.0 %     8.9 %     12.8 %
                                 
    Three Months Ended     Nine Months Ended  
    September 30,     September 30,  
    2009     2008     2009     2008  
            (In thousands, except per gallon data)          
Net Sales:
                               
Fuel sales
  $ 493,017     $ 698,226     $ 1,244,117     $ 1,883,601  
Excise taxes included in fuel sales
    (57,415 )     (48,433 )     (165,579 )     (147,299 )
Lubricant sales
    26,665       43,784       86,801       123,716  
Other sales
    6,875       9,178       21,127       32,158  
 
                       
Net sales
  $ 469,142     $ 702,755     $ 1,186,466     $ 1,892,176  
 
                       
 
                               
Cost of Products Sold:
                               
Fuel cost of products sold
  $ 477,838     $ 680,470     $ 1,200,856     $ 1,841,257  
Excise taxes included in fuel sales
    (57,415 )     (48,433 )     (165,579 )     (147,299 )
Lubricant cost of products sold
    23,997       37,197       79,071       107,860  
Other cost of products sold
    3,123       1,737       8,371       7,051  
 
                       
Cost of products sold
  $ 447,543     $ 670,971     $ 1,122,719     $ 1,808,869  
 
                       
 
                               
Fuel margin per gallon (1)
  $ 0.07     $ 0.09     $ 0.07     $ 0.08  
 
                       
 
(1)   Fuel margin per gallon is a measurement calculated by dividing the difference between fuel sales and cost of fuel sales for our wholesale segment by the number of gallons sold.
 
(2)   Lubricant margin is a measurement calculated by dividing the difference between lubricant sales and lubricant cost of products sold by lubricant sales. Lubricant margin is a measure frequently used in the petroleum products wholesale industry to measure operating results related to lubricant sales.

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Three Months Ended September 30, 2009 Compared to the Three Months Ended September 30, 2008
     Net Sales. Net sales consist primarily of sales of refined products net of excise taxes, lubricants and freight. Net sales for the three months ended September 30, 2009, were $469.1 million, compared to $702.8 million for the three months ended September 30, 2008, a decrease of $233.7 million, or 33.3%. This decrease was primarily due to a decrease in the average sales price of refined products and decreased sales volume and average price of lubricants. The average price per gallon of refined products decreased from $3.73 in the third quarter of 2008, to $2.31 in the third quarter of 2009. Lubricant sales volume decreased from 4.4 million gallons in the third quarter of 2008 to 3.0 million gallons for the same period in 2009. Our average price per gallon of lubricants decreased from $10.05 in the third quarter of 2008 to $8.88 in the third quarter of 2009. These decreases were partially offset by increased fuel volumes sold. The fuel volume sold increased from 187.0 million gallons for the three months ended September 30, 2008 to 213.6 million gallons for the same period in 2009.
     Cost of Products Sold (exclusive of depreciation and amortization). Cost of products sold includes costs of refined products net of excise taxes, lubricants and delivery freight. Cost of products sold was $447.5 million for the three months ended September 30, 2009, compared to $671.0 million for the three months ended September 30, 2008, a decrease of $223.5 million, or 33.3%. This decrease was primarily due to decreased costs of refined products, and decreased purchased volume and cost of lubricants. The average cost per gallon of refined products decreased from $3.63 in the third quarter of 2008 to $2.24 in the third quarter of 2009. The average cost per gallon of lubricants decreased from $8.55 in the third quarter of 2008 to $7.99 in the third quarter of 2009. These decreases were partially offset by increased fuel volumes purchased.
     Direct Operating Expenses (exclusive of depreciation and amortization). Direct operating expenses include costs associated with the operations of our wholesale division such as labor, repairs and maintenance, rentals and leases, insurance, property taxes, and environmental compliance costs. Direct operating expenses were $12.8 million for the three months ended September 30, 2009, compared to $16.8 million for the three months ended September 30, 2008, a decrease of $4.0 million, or 23.8%. This decrease primarily resulted from decreased fuel expenses ($2.2 million), repairs and maintenance ($0.7 million), labor expense ($0.5 million) and environmental expenses ($0.2 million).
     Selling, General and Administrative Expenses. Selling, general and administrative expenses consist primarily of overhead and marketing expenses. Selling, general and administrative expenses were $3.7 million for the three months ended September 30, 2009, compared to $4.8 million for the three months ended September 30, 2008, a decrease of $1.1 million, or 22.9%. This decrease primarily resulted from decreased personnel costs ($0.4 million), decreased outside administrative services ($0.2 million), decreased bad debt expense ($0.1 million), decreased utilities expense ($0.1 million) and decreased bank fees ($0.1 million).
     Depreciation and Amortization. Depreciation and amortization for the three months ended September 30, 2009, was $1.4 million, compared to $1.3 million for the three months ended September 30, 2008, an increase of $0.1 million, or 7.7%.
     Operating Income (Loss). Operating income for the three months ended September 30, 2009, was $3.7 million, compared to operating income of $8.8 million for the three months ended September 30, 2008, a decrease of $5.1 million. This decrease primarily resulted from lower fuel and lubricant margins in the third quarter of 2009 compared to the same period in 2008. This decrease was partially offset by lower direct operating expenses and selling, general and administrative expenses.
Nine Months Ended September 30, 2009 Compared to the Nine Months Ended September 30, 2008
     Net Sales. Net sales consist primarily of sales of refined products net of excise taxes, lubricants and freight. Net sales for the nine months ended September 30, 2009, were $1,186.5 million, compared to $1,892.2 million for the nine months ended September 30, 2008, a decrease of $705.7 million, or 37.3%. This decrease was primarily due to a decrease in the sales price of refined products and decreased sales volume of lubricants. The average sales price per gallon of refined products decreased from $3.53 in the first nine months of 2008 to $2.03 in the first nine months of 2009. Lubricant sales volume decreased from 13.3 million gallons in the first nine months of 2008 to 9.1 million gallons for the same period in 2009. This decrease was partially offset by increased fuel volumes sold.

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     Cost of Products Sold (exclusive of depreciation and amortization). Cost of products sold includes costs of refined products net of excise taxes, lubricants and delivery freight. Cost of products sold was $1,122.7 million for the nine months ended September 30, 2009, compared to $1,808.9 million for the nine months ended September 30, 2008, a decrease of $686.2 million, or 37.9%. This decrease was primarily due to decreased costs of refined products and decreased purchased volume of lubricants. The average cost per gallon decreased from $3.44 in the first nine months of 2008, to $1.96 in the first nine months of 2009. This decrease was partially offset by increased fuel volumes purchased.
     Direct Operating Expenses (exclusive of depreciation and amortization). Direct operating expenses include costs associated with the operations of our wholesale division such as labor, repairs and maintenance, rentals and leases, insurance, property taxes, and environmental compliance costs. Direct operating expenses were $40.2 million for the nine months ended September 30, 2009, compared to $50.2 million for the nine months ended September 30, 2008, a decrease of $10.0 million, or 19.9%. This decrease primarily resulted from decreased fuel expense ($6.1 million), decreased repairs and maintenance ($2.1 million), vehicle licenses and permits ($0.6 million), trailer leases ($0.6 million), and outside maintenance services ($0.6 million).
     Selling, General and Administrative Expenses. Selling, general and administrative expenses consist primarily of overhead and marketing expenses. Selling, general and administrative expenses were $12.6 million for the nine months ended September 30, 2009, compared to $14.4 million for the nine months ended September 30, 2008, a decrease of $1.8 million, or 12.5%. This decrease primarily resulted from decreases in outside services ($0.5 million), personnel costs ($0.4 million), utilities ($0.3 million), repairs and maintenance ($0.3 million), administration supplies ($0.2 million), bank fees ($0.2 million), advertising and promotions ($0.2 million) and travel and entertainment ($0.2 million). These decreases were partially offset by an increase in bad debt expense ($0.6 million).
     Goodwill Impairment Loss. We have a policy to test goodwill for impairment annually or more frequently if indications of impairment exist. As of June 30, 2009, we determined that all of the goodwill in the reporting unit of our wholesale group was impaired. The total impact of the goodwill impairments for the nine months ended September 30, 2009 was a non-cash charge of $41.2 million. There were no such impairments for the nine months ended September 30, 2008.
     Depreciation and Amortization. Depreciation and amortization for the nine months ended September 30, 2009, was $4.2 million, compared to $4.1 million for the nine months ended September 30, 2008, an increase of $0.1 million, or 2.4%.
     Operating Income (Loss). Operating loss for the nine months ended September 30, 2009, was $34.5 million, compared to operating income of $14.7 million for the nine months ended September 30, 2008, a decrease of $49.2 million. This decrease primarily resulted from a goodwill impairment loss and decreased lubricant margins in the first nine months of 2009 compared to the same period in 2008. These decreases were partially offset by decreased direct operating expenses and decreased selling, general and administrative expenses.
Contractual Obligations and Commercial Commitments
     As a result of the issuance of the Senior Secured Notes and Convertible Senior Notes and the payment on our term loan in June 2009, our long-term debt obligations described in our 2008 Form 10-K were revised. Our long-term debt obligations are $42.3 million for the remainder of 2009, $239.9 million for 2010 through 2011, $235.6 million for 2012 through 2013, and $1,278.1 million for 2014 through May 2017 using the minimum principal payments and interest calculated using interest rates at September 30, 2009.
     Except for the changes described above, there have been no material changes outside the ordinary course of business from our contractual obligations and commercial commitments detailed in our 2008 Form 10-K.

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Liquidity and Capital Resources
Cash Flows
     The following table sets forth our cash flows for the periods indicated below:
                 
    Nine Months Ended  
    September 30,  
    2009     2008  
    (In thousands)  
Cash flows provided by operating activities
  $ 148,553     $ 170,110  
Cash flows used in investing activities
    (93,367 )     (155,702 )
Cash flows used in financing activities
    (69,964 )     (131,478 )
 
           
Net decrease in cash and cash equivalents
  $ (14,778 )   $ (117,070 )
 
           
Cash Flows Provided by Operating Activities
     Net cash provided by operating activities for the nine months ended September 30, 2009, was $148.6 million. The most significant providers of cash were adjustments to net income for non-cash items such as goodwill impairment loss ($299.6 million), depreciation and amortization ($109.4 million), write-off of unamortized loan fees ($9.0 million), deferred income taxes ($11.2 million), amortization of loan fees ($4.8 million), amortization of original issue discount ($4.2 million), and stock-based compensation ($3.5 million). These increases in cash were partially offset by a net cash outflow from a change in operating assets and liabilities ($40.3 million).
     Net cash provided by operating activities for the nine months ended September 30, 2008, was $170.1 million. The most significant providers of cash were our net income ($77.0 million) and adjustments to net income for non-cash items such as depreciation and amortization ($82.6 million), the write-off of unamortized loan fees ($10.9 million), deferred income taxes ($10.0 million) and stock-based compensation ($6.4 million). These increases in cash were partially offset by a net cash outflow from a change in operating assets and liabilities ($20.6 million).
Cash Flows Used in Investing Activities
     Net cash used in investing activities for the nine months ended September 30, 2009, was $93.4 million (including capitalized interest of $5.7 million), mainly relating to capital expenditures. Capital spending for the first nine months of 2009 included spending on the low sulfur gasoline project ($41.0 million), the MSAT project ($9.9 million) and the diesel hydrotreater revamp project ($3.5 million) at our El Paso refinery; coker upgrades ($6.0 million) and the MSAT project ($4.5 million) at our Yorktown refinery; and several other improvement and regulatory projects for our refining group. In addition, our total capital spending included projects for our retail group ($2.8 million), our corporate group ($1.1 million), and our wholesale group ($0.2 million). We currently expect to spend approximately $120.0 million (excluding capitalized interest) in capital expenditures for all of 2009.
     Net cash used in investing activities for the nine months ended September 30, 2008, was $155.7 million, mainly relating to capital expenditures. Capital spending for the first nine months of 2008 included spending on the low sulfur gasoline project ($57.8 million), the naphtha hydrotreater ($8.1 million), a new laboratory ($4.8 million), and the acid and sulfur gas facilities ($2.4 million) at our El Paso refinery; the low sulfur gasoline project ($23.4 million), improvements to the laboratory and fire station ($2.3 million), and the ultra blowdown stack ($2.1 million) at our Yorktown refinery; and several other improvement and regulatory projects for our refining group. In addition, our total capital spending included projects for our retail group ($6.9 million), our corporate group ($5.1 million) and our wholesale group ($4.2 million).

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Cash Flows Used in Financing Activities
     Net cash used in financing activities for the nine months ended September 30, 2009, was $70.0 million. Cash used in financing activities for the first nine months of 2009 included a net decrease to our revolving credit facility ($60.0 million), principal payments on our term loan ($922.4 million), deferred financing costs ($4.5 million) and the repurchases of common stock to cover payroll withholding taxes for certain employees in connection with the vesting of restricted shares awarded under the Western Refining Long-Term Incentive Plan ($0.6 million). These decreases in cash were significantly offset by the net proceeds from the issuance of our Senior Secured Notes ($538.2 million), our Convertible Senior Notes ($209.0 million) and common stock ($170.4 million).
     Net cash used in financing activities for the nine months ended September 30, 2008, was $131.5 million. Cash used in financing activities for the first nine months of 2008 included a net decrease to our revolving credit facility ($90.0 million), deferred loan fees incurred ($22.4 million), dividends paid ($8.2 million), principal payments on our term loan ($9.8 million), and the repurchases of common stock to cover payroll withholding taxes for certain employees in connection with the vesting of restricted shares awarded under the Western Refining Long-Term Incentive Plan ($1.2 million).
Working Capital
     Our primary sources of liquidity are cash generated from our operating activities, existing cash balances, and our revolving credit facility. Our ability to generate sufficient cash flows from our operating activities will continue to be primarily dependent on producing or purchasing, and selling, sufficient quantities of refined products at margins sufficient to cover fixed and variable expenses. Refining margins have been extremely volatile throughout 2008 and so far in 2009. For example, our refining margins decreased from $13.59 per throughput barrel in the first quarter of 2009 to $9.47 per throughput barrel in the second quarter of 2009 to $7.28 per throughput barrel in the third quarter of 2009. If our refining margins deteriorate significantly, or if our earnings and cash flows suffer for any other reason, we could be unable to comply with the financial covenants set forth in our credit facilities (described below). If we fail to satisfy these covenants, we could be prohibited from borrowing for our working capital needs and issuing letters of credit, which would hinder our ability to purchase sufficient quantities of crude oil to operate our refineries at planned rates. To the extent that we are unable to generate sufficient cash flows from operations, or if we are unable to borrow or issue letters of credit under the revolving credit facility, we would need to seek additional financing, if available, in order to operate our business.
     We are currently considering raising additional funds through public or private equity or debt financings to refinance the remaining balance on our term loan. We have also begun the process to seek amendments to certain of the covenants in our credit agreements. Although we were in compliance with these covenants through the end of the third quarter of 2009, we believe it is prudent to start this process in the event that the low refining margin environment continues for an extended period of time. We can give no assurances that we will be able to raise any additional funds or amend these financial covenants on terms favorable to us, or at all. If additional funds are obtained by issuing equity securities, our existing stockholders could be diluted. We are also considering potential asset sales and other operational initiatives. Given current market conditions we are not optimistic about the sale of any assets in the near term.
     In addition, our future capital expenditures and other cash requirements could be higher than we currently expect as a result of various factors described in Part I. — Item 1A. “Risk Factors” in our 2008 Form 10-K, and elsewhere in this report.
     Working capital at September 30, 2009, was $316.1 million, consisting of $974.9 million in current assets and $658.8 million in current liabilities. In addition, as of September 30, 2009, the gross availability under the 2007 Revolving Credit Agreement was $513.1 million pursuant to the borrowing base due to lower values of inventories and accounts receivable. As of September 30, 2009, we had net availability under the 2007 Revolving Credit Agreement of $221.1 million due to $292.0 million in letters of credit outstanding and no outstanding direct borrowings. Working capital at December 31, 2008, was $314.5 million, consisting of $815.2 million in current assets and $500.7 million in current liabilities. As of December 31, 2008, we had net availability of $124.1 million under our 2007 Revolving Credit Agreement. On November 6, 2009, the gross availability under the 2007 Revolving Credit Agreement was $545.8 million pursuant to the borrowing base due to lower values of inventory and accounts receivable. On November 6, 2009, we had net availability under the 2007 Revolving Credit Agreement of $253.8 million due to $272.0 million in letters of credit outstanding and $20.0 million in direct borrowings.

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Indebtedness
     Senior Secured Notes. In June 2009, we issued two tranches of Senior Secured Notes under an indenture dated June 12, 2009. The first tranche consisted of $325.0 million in aggregate principal amount of 11.25% Senior Secured Notes, or the Fixed Rate Notes. The second tranche consisted of $275.0 million Senior Secured Floating Rate Notes, or the Floating Rate Notes, and together with the Fixed Rate Notes, the Senior Secured Notes. The Fixed Rate Notes will pay interest semi-annually in cash in arrears on June 15 and December 15 of each year, beginning on December 15, 2009 at a rate of 11.25% per annum and will mature on June 15, 2017. We may redeem the Fixed Rate Notes at our option beginning on June 15, 2013 through June 14, 2014 at a premium of 5.625%; from June 15, 2014 through June 14, 2015 at a premium of 2.813%; and at par thereafter. As of September 30, 2009, the fair value of the Fixed Rate Notes was $281.4 million.
     The Floating Rate Notes pay interest quarterly beginning on September 15, 2009 at a per annum rate, reset quarterly, equal to 3-month LIBOR (subject to a LIBOR floor of 3.25%) plus 7.50% and will mature on June 15, 2014. The interest rate on the Floating Rate Notes as of September 30, 2009 was 10.75%. We may redeem the Floating Rate Notes at our option beginning on December 15, 2011 through June 14, 2012 at a premium of 5.0%; from June 15, 2012 through June 14, 2013 at a premium of 3.0%; and at a premium of 1.0% thereafter. Proceeds from the issuance of the Fixed Rate Notes were $290.7 million, net of an original issue discount of $27.8 million and underwriting discounts of $6.5 million. Proceeds from the issuance of the Floating Rate Notes were $247.5 million, net of an original issue discount of $22.0 million and underwriting discounts of $5.5 million. As of September 30, 2009, we had paid $2.1 million in other financing costs related to the Senior Secured Notes. The fair value of the Floating Rate Notes was $241.2 million at September 30, 2009. We are amortizing the original issue discounts using the effective interest method over the life of the notes. The combined proceeds from the issuance and sale of the Senior Secured Notes were used to repay a portion of the outstanding indebtedness under the Term Loan Credit Agreement, or Term Loan.
     The Senior Secured Notes are guaranteed on a senior secured basis by all of our domestic restricted subsidiaries in existence on the date the Senior Secured Notes were issued and will be guaranteed by all future wholly-owned domestic restricted subsidiaries and by any restricted subsidiary that guarantees any of our indebtedness under credit facilities that are secured by a lien on the collateral securing the Senior Secured Notes. The Senior Secured Notes are also secured on a first-priority basis, equally and ratably with our Term Loan and any future other pari passu secured obligation, by the collateral securing the Term Loan, which consists of our fixed assets, including our refineries, and on a second-priority basis, equally and ratably with the Term Loan and any future other pari passu secured obligation, by the collateral securing the Revolving Credit Agreement, which consists of our cash, accounts receivables and inventory.
     The indenture governing the Senior Secured Notes contains covenants that limit our (and most of our subsidiaries’) ability to, among other things: (i) pay dividends or make other distributions in respect of our capital stock or make other restricted payments; (ii) make certain investments; (iii) sell certain assets; (iv) incur additional debt or issue certain preferred shares; (v) create liens on certain assets to secure debt; (vi) consolidate, merge, sell or otherwise dispose of all or substantially all of our assets; (vii) restrict dividends or other payments from restricted subsidiaries; and (viii) enter into certain transactions with our affiliates. These covenants are subject to a number of important limitations and exceptions. The indenture governing the Senior Secured Notes also provides for events of default, which, if any of them occurs, would permit or require the principal, premium, if any, and interest on all then outstanding Senior Secured Notes to be due and payable immediately.
     We may issue additional notes from time to time pursuant to the indenture governing the Senior Secured Notes.
     Convertible Senior Notes. We issued and sold $215.5 million in aggregate principal amount of its 5.75% Senior Convertible Notes due 2014, or the Convertible Senior Notes, during June and July 2009. The Convertible Senior Notes are unsecured and will pay interest semi-annually in arrears at a rate of 5.75% per year beginning on December 15, 2009. The Convertible Senior Notes will mature on June 15, 2014. The initial conversion rate for the Convertible Senior Notes is 92.5926 shares of common stock per $1,000 principal amount of Convertible Senior Notes (equivalent to an initial conversion price of approximately $10.80 per share of common stock). In lieu of delivery of shares of common stock in satisfaction of our obligation upon conversion of the Convertible Senior Notes, we may elect to settle conversions entirely in cash or by net share settlement. Proceeds from the issuance of

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the Convertible Senior Notes in June and July 2009 were $209.0 million, net of underwriting discounts of $6.5 million and were used to repay a portion of outstanding indebtedness under the Term Loan. Issuers of convertible debt instruments that may be settled in cash upon conversion (including partial cash settlement) are required to separately account for the liability and equity (conversion feature) components of the instruments in a manner reflective of the issuer’s nonconvertible debt borrowing rate. The borrowing rate we used to determine the liability and equity components of the Convertible Senior Notes was 13.5%. As of September 30, 2009, we had paid $0.5 million in other financing costs related to the Convertible Senior Notes. We valued the conversion feature at $60.9 million and recorded additional paid-in capital of $36.3 million, net of deferred income taxes of $22.6 million and transaction costs of $2.0 million, related to the equity portion of this convertible debt. As of September 30, 2009, the fair value of the Convertible Senior Notes was $146.9 million.
     Term Loan Credit Agreement. The Term Loan has a maturity date of May 30, 2014 and it is secured by our fixed assets, including our refineries. The Term Loan provides for principal payments on a quarterly basis of $13.0 million annually until March 31, 2014 with the remaining balance due on the maturity date. We made principal payments on the Term Loan of $922.4 million in the nine months ended September 30, 2009 primarily from the net proceeds of the debt and common stock offerings in June and July 2009 and $9.8 million for the same period in 2008. The average interest rates under the Term Loan for the nine months ended September 30, 2009 and 2008 were 8.46% and 6.03%, respectively. As of September 30, 2009, the interest rate under the Term Loan was 8.25%. We amended the Term Loan during the second quarter of 2009 in connection with the new debt offerings and to modify certain of the financial covenants. To effect this amendment, we paid $1.9 million in amendment fees. As a result of the partial paydown of the Term Loan in June 2009, we expensed $9.0 million during the second quarter to write-off a portion of the unamortized loan fees related to the Term Loan. As of September 30, 2009, the fair value of the Term Loan was $356.7 million. On June 30, 2008, we entered into an amendment to our term loan credit agreement. As a result of such amendment, we recorded an expense of $10.9 million related to the write-off of deferred loan fees incurred prior to such amendment.
     2007 Revolving Credit Agreement. The 2007 Revolving Credit Agreement matures on May 31, 2012 and provides loans of up to $800 million. The 2007 Revolving Credit Agreement, secured by certain cash, accounts receivable and inventory, can be used to refinance our existing indebtedness and that of our subsidiaries, to finance working capital and capital expenditures and for other general corporate purposes. The 2007 Revolving Credit Agreement is a collateral-based facility with total borrowing capacity, subject to borrowing base amounts based upon eligible receivables and inventory, and provides for letters of credit and swing line loans. As of September 30, 2009, the gross availability under the 2007 Revolving Credit Agreement was $513.1 million pursuant to the borrowing base due to lower values of inventories and accounts receivable. As of September 30, 2009, we had net availability under the 2007 Revolving Credit Agreement of $221.1 million due to $292.0 million in letters of credit outstanding and no outstanding direct borrowings. On November 6, 2009, the gross availability under the 2007 Revolving Credit Agreement was $531.3 million pursuant to the borrowing base due to lower values of inventory and accounts receivable. As of November 6, 2009, we had net availability under the 2007 Revolving Credit Agreement of $253.8 million due to $272.0 million in letters of credit outstanding and $20.0 million in direct borrowings. The average interest rates under the 2007 Revolving Credit Agreement for the nine months ended September 30, 2009 and 2008 were 5.13% and 6.67%, respectively. At September 30, 2009, the interest rate under the 2007 Revolving Credit Agreement was 4.75%. We amended the 2007 Revolving Credit Agreement during the second quarter of 2009 in connection with the new debt offerings and to modify certain of the financial covenants.
     Guarantees of the Term Loan and the Revolving Credit Agreement. The Term Loan and the 2007 Revolving Credit Agreement, or together the Agreements, are guaranteed, on a joint and several basis, by subsidiaries of Western Refining, Inc. The guarantees related to the Agreements remain in effect until such time that the terms of the Agreements are satisfied and subsequently terminated. Amounts potentially due under these guarantees are equal to the amounts due and payable under the respective Agreements at any given time. No amounts have been recorded for these guarantees. The guarantees are not subject to recourse to third parties.
     Certain Covenants in Term Loan and Revolving Credit Agreement. The Agreements contain certain covenants, including limitations on debt, investments and dividends, and financial covenants relating to minimum interest coverage, maximum leverage and minimum EBITDA. Pursuant to the Agreements, we have also agreed to not pay cash dividends on its common stock through 2009. We were in compliance with all applicable covenants set forth in the Agreements at September 30, 2009. See Note 19, “Contingencies” in the Notes to Condensed Consolidated Financial Statements included in this quarterly report for additional discussion of these financial covenants.

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     Interest Rate Swap. On January 31, 2008, we entered into an amortizing LIBOR interest rate swap to manage the variability of cash flows related to the interest payments for the variable-rate term loan. The notional amount of the swap was $1.0 billion with a LIBOR interest rate fixed at 3.645% for the life of the swap. We designated this receive-variable and pay-fixed swap as a cash flow hedge. On August 6, 2008, we terminated the interest rate swap at no cost.
Off-Balance Sheet Arrangements
     We had no off-balance sheet arrangements as of September 30, 2009.
Fair Value Measurement
     On January 1, 2008, we adopted the provisions of FASC 820, Fair Value Measurements and Disclosures, or FASC 820, for our financial assets and liabilities. FASC 820, among other things, requires enhanced disclosures about assets and liabilities measured at fair value. On January 1, 2009, we adopted the provisions of FASC 820 for our nonfinancial assets and liabilities. The adoption of these provisions did not have a material effect on our financial condition or results of operations, and had no impact on methodologies we use in measuring the fair value of our assets and liabilities.
     We utilize the market approach to measure fair value for our financial assets and liabilities. The market approach uses prices and other relevant information generated by market transactions involving identical or comparable assets or liabilities.
Item 3.   Quantitative and Qualitative Disclosures About Market Risk
     Changes in commodity prices and interest rates are our primary sources of market risk.
Commodity Price Risk
     We are exposed to market risks related to the volatility of crude oil and refined product prices, as well as volatility in the price of natural gas used in our refinery operations. Our financial results can be affected significantly by fluctuations in these prices, which depend on many factors, including demand for crude oil, gasoline and other refined products, changes in the economy, worldwide production levels, worldwide inventory levels and governmental regulatory initiatives. Our risk management strategy identifies circumstances in which we may utilize the commodity futures market to manage risk associated with these price fluctuations.
     In order to manage the uncertainty relating to inventory price volatility, we have generally applied a policy of maintaining inventories at or below a targeted operating level. In the past, circumstances have occurred, such as turnaround schedules or shifts in market demand that have resulted in variances between our actual inventory level and our desired target level. We may utilize the commodity futures market to manage these anticipated inventory variances.
     We maintain inventories of crude oil, other feedstocks and blendstocks, and refined products, the values of which are subject to wide fluctuations in market prices driven by worldwide economic conditions, regional and global inventory levels, and seasonal conditions. As of September 30, 2009, we held approximately 7.2 million barrels of crude oil, refined product, and other inventories valued under the LIFO valuation method with an average cost of $57.81 per barrel. As of September 30, 2009, the current cost exceeded aggregated LIFO costs of our crude oil, refined product and other feedstock and blendstock inventories by $91.4 million.
     In accordance with FASC 815, Derivatives and Hedging, all commodity futures contracts, price swaps, and options are recorded at fair value and any changes in fair value between periods are recorded in the other income (expense) section of our Condensed Consolidated Statement of Operations as gain (loss) from derivative activities.
     We selectively utilize commodity derivatives to manage our price exposure to inventory positions or to fix margins on certain future sales volumes. The commodity derivative instruments may take the form of futures contracts, price swaps, or options and are entered into with counterparties that we believe to be creditworthy. We elected not to pursue hedge accounting treatment for these instruments for financial accounting purposes. Therefore,

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changes in the fair value of these derivative instruments are included in income in the period of change. Net gains or losses associated with these transactions are reflected in gain (loss) from derivative activities at the end of each period. For the three and nine months ended September 30, 2009, we had $0.7 million and $13.3 million, respectively, in net realized and unrealized losses accounted for using mark-to-market accounting. For the three months ended September 30, 2008, we had $6.0 million in net realized and unrealized gains accounted for using mark-to-market accounting. For the nine months ended September 30, 2008, we had $7.8 million in net realized and unrealized losses accounted for using mark-to-market accounting.
     At September 30, 2009, we had open commodity derivative instruments consisting of refined products price swaps on 659,000 barrels, primarily to protect the value of certain gasoline and blendstock inventories for the fourth quarter of 2009. These open instruments had total unrealized net losses at September 30, 2009, of approximately $2.7 million.
     During the three and nine months ended September 30, 2009, we did not have any commodity derivative instruments that were designated and accounted for as hedges.
Interest Rate Risk
     As of September 30, 2009, $633.1 million of our outstanding debt, excluding unamortized discount, was at floating rates based on LIBOR and Prime rates. An increase in these base rates of 1% would increase our interest expense by $6.3 million per year.
Item 4.   Controls and Procedures
     The Company, under the supervision and with the participation of its management, including the Chief Executive Officer and Chief Financial Officer, has evaluated the effectiveness of the Company’s disclosure controls and procedures, as defined in Rules 13a-15(e) and 15d-15(e) of the Securities Exchange Act of 1934, as of September 30, 2009. Based on that evaluation, the Company’s Chief Executive Officer and Chief Financial Officer concluded that the Company’s disclosure controls and procedures were effective as of September 30, 2009.
     There were no changes in the Company’s internal control over financial reporting during the quarter ended September 30, 2009, that have materially affected, or are reasonably likely to materially affect, the Company’s internal control over financial reporting.

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Part II
Other Information
Item 1.   Legal Proceedings
     In the ordinary conduct of our business, we are subject to periodic lawsuits, investigations and claims, including environmental claims and employee-related matters. We also incorporate by reference the information regarding contingencies in Note 19 to the Condensed Consolidated Financial Statements set forth in Part I. — Item 1. Although we cannot predict with certainty the ultimate resolution of lawsuits, investigations and claims asserted against us, we do not believe that any currently pending legal proceedings to which we are a party will have a material adverse effect on our business, financial condition or results of operations.
Item 1A.   Risk Factors
     A discussion of the risks we face can be found in our 2008 Form 10-K under Part I. — Item 1A. “Risk Factors” and in our Quarterly Report on Form 10-Q for the quarter ended June 30, 2009 under Part II. — Item 1A. “Risk Factors.”

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Item 2.   Unregistered Sales of Equity Securities and Use of Proceeds
Purchases of Equity Securities by the Issuer and Affiliated Purchasers
                                 
                    Total Number of    
                    Shares Purchased  
            Average Price   as Part of a   Maximum Number of
    Total Number   Paid per Share   Publicly   Shares that May Yet
    of Shares   (Including   Announced   Be Purchased Under
Period   Purchased   Commissions)   Program   the Plans or Programs
July 1 to July 31, 2009
        $       N/A       N/A  
August 1 to August 31, 2009 (1)
    2,205       6.43       N/A       N/A  
September 1 to September 30, 2009 (1)
    1,667       6.90       N/A       N/A  
 
                               
Total
    3,872       6.63       N/A       N/A  
 
                               
 
(1)   These repurchases were in private transactions directly with certain of our employees to provide funds to satisfy payroll withholding taxes for such employees in connection with the vesting of restricted shares awarded under our Long-Term Incentive Plan. The repurchased shares are now held by us as treasury shares.
     Under the amendments to our 2007 Term Loan Agreement and 2007 Revolver Credit Agreement in June 2008, we agreed not to declare and pay cash dividends to our common stockholders until after December 31, 2009. The payment of dividends is also restricted under the terms of our Senior Secured Notes.

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Item 6.   Exhibits
     
Number   Exhibit Title
 
   
31.1*
  Certification Statement of Chief Executive Officer of the Company pursuant to Section 302 of the Sarbanes-Oxley Act of 2002.
 
   
31.2*
  Certification Statement of Chief Financial Officer of the Company pursuant to Section 302 of the Sarbanes-Oxley Act of 2002.
 
   
32.1*
  Certification Statement of Chief Executive Officer of the Company pursuant to Section 906 of the Sarbanes-Oxley Act of 2002.
 
   
32.2*
  Certification Statement of Chief Financial Officer of the Company pursuant to Section 906 of the Sarbanes-Oxley Act of 2002.
 
*   Filed herewith.

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SIGNATURES
     Pursuant to the requirements of the Securities Exchange Act of 1934, the Registrant has duly caused this report on Form 10-Q for the quarter ended September 30, 2009, to be signed on its behalf by the undersigned, thereunto duly authorized.
WESTERN REFINING, INC.
         
Signature   Title   Date
         
/s/ Gary R. Dalke
 
     Gary R. Dalke
  Chief Financial Officer
  (Principal Financial Officer)
  November 9, 2009

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