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UNITED STATES
SECURITIES AND EXCHANGE COMMISSION

WASHINGTON, D.C. 20549

 


 

FORM 10-Q

 


 

(MARK ONE)

ý

 

QUARTERLY REPORT PURSUANT TO SECTION 13 OR 15(d) OF THE SECURITIES EXCHANGE ACT OF 1934

 

 

 

FOR THE PERIOD ENDED SEPTEMBER 30, 2004

 

 

 

OR

 

 

 

o

 

TRANSITION REPORT PURSUANT TO SECTION 13 OR 15(d) OF THE SECURITIES EXCHANGE ACT OF 1934

 

FOR THE TRANSITION PERIOD FROM                 TO                 .

 

COMMISSION FILE NO. 0-28218

 


 

AFFYMETRIX, INC.

(Exact name of Registrant as specified in its charter)

 

DELAWARE

 

77-0319159

(State or other jurisdiction of
incorporation or organization)

 

(I.R.S. Employer
Identification Number)

 

 

 

3380 CENTRAL EXPRESSWAY
SANTA CLARA, CALIFORNIA

 

95051

(Address of principal executive offices)

 

(Zip Code)

 

Registrant’s telephone number, including area code: (408) 731-5000

 


 

Indicate by check mark whether the registrant (1) has filed all reports required to be filed by Section 13 or 15(d) of the Securities Exchange Act of 1934 during the preceding 12 months (or for such shorter period that the registrant was required to file such reports), and (2) has been subject to such filing requirements for the past 90 days. Yes ý  No o

 

Indicate by check mark whether the Registrant is an accelerated filer (as defined in Rule 12b-2 of the Act). Yes ý  No o

 

COMMON SHARES OUTSTANDING ON OCTOBER 31, 2004:  60,957,819

 

 



 

AFFYMETRIX, INC.

 

TABLE OF CONTENTS

 

PART I. FINANCIAL INFORMATION

 

 

 

 

 

 

Item 1.

Financial Statements (Unaudited)

 

 

 

 

 

 

 

Condensed Consolidated Balance Sheets at September 30, 2004 and December 31, 2003

 

 

 

 

 

 

 

Condensed Consolidated Statements of Operations for the Three and Nine Months Ended September 30, 2004 and 2003

 

 

 

 

 

 

 

Condensed Consolidated Statements of Cash Flows for the Nine Months Ended September 30, 2004 and 2003

 

 

 

 

 

 

 

Notes to Condensed Consolidated Financial Statements

 

 

 

 

 

 

Item 2.

Management’s Discussion and Analysis of Financial Condition and Results of Operations

 

 

 

 

 

 

Item 3.

Quantitative and Qualitative Disclosures About Market Risk

 

 

 

 

 

 

Item 4.

Controls and Procedures

 

 

 

 

 

PART II. OTHER INFORMATION

 

 

 

 

 

 

Item 1.

Legal Proceedings

 

 

 

 

 

 

Item 5.

Other Information

 

 

 

 

 

 

Item 6.

Exhibits and Reports on Form 8-K

 

 

 

 

 

SIGNATURES

 

 

2



 

PART I. FINANCIAL INFORMATION

ITEM 1. FINANCIAL STATEMENTS

 

AFFYMETRIX, INC.

CONDENSED CONSOLIDATED BALANCE SHEETS

(IN THOUSANDS)

(UNAUDITED)

 

 

 

September 30,
2004

 

December 31,
2003

 

 

 

 

 

(Note 1)

 

ASSETS

 

 

 

 

 

Current assets:

 

 

 

 

 

Cash and cash equivalents

 

$

26,369

 

$

275,928

 

Available-for-sale securities

 

155,359

 

183,955

 

Accounts receivable

 

65,823

 

71,343

 

Inventories

 

19,807

 

22,632

 

Prepaid expenses and other current assets

 

7,683

 

7,443

 

Total current assets

 

275,041

 

561,301

 

Property and equipment, net

 

62,630

 

62,611

 

Acquired technology rights, net

 

65,578

 

27,818

 

Goodwill

 

18,601

 

18,601

 

Notes receivable from employees

 

2,715

 

1,500

 

Other assets

 

27,443

 

28,333

 

 

 

$

452,008

 

$

700,164

 

 

 

 

 

 

 

LIABILITIES AND STOCKHOLDERS’ EQUITY

 

 

 

 

 

Current liabilities:

 

 

 

 

 

Accounts payable and accrued liabilities

 

$

52,960

 

$

71,044

 

Deferred revenue — current portion

 

31,932

 

30,019

 

Convertible subordinated notes — short-term

 

 

267,460

 

Total current liabilities

 

84,892

 

368,523

 

Deferred revenue — long-term

 

33,064

 

43,346

 

Other long-term liabilities

 

4,299

 

3,240

 

Convertible notes

 

120,000

 

120,000

 

Stockholders’ equity:

 

 

 

 

 

Common stock

 

608

 

595

 

Additional paid-in capital

 

393,270

 

370,304

 

Notes receivable from stockholders

 

 

(428

)

Deferred stock compensation

 

(4,270

)

(5,185

)

Accumulated other comprehensive loss

 

(1,749

)

(1,572

)

Accumulated deficit

 

(178,106

)

(198,659

)

Total stockholders’ equity

 

209,753

 

165,055

 

 

 

$

452,008

 

$

700,164

 

 


Note 1:                             The condensed consolidated balance sheet at December 31, 2003 has been derived from the audited consolidated financial statements at that date included in the Company’s Form 10-K for the fiscal year ended December 31, 2003.

 

See accompanying notes.

 

3



 

AFFYMETRIX, INC.

CONDENSED CONSOLIDATED STATEMENTS OF OPERATIONS

(IN THOUSANDS, EXCEPT PER SHARE AMOUNTS)

(UNAUDITED)

 

 

 

Three Months Ended
September 30,

 

Nine Months Ended
September 30,

 

 

 

2004

 

2003

 

2004

 

2003

 

Revenue:

 

 

 

 

 

 

 

 

 

Product sales

 

$

62,318

 

$

57,467

 

$

185,073

 

$

153,441

 

Product related revenue

 

13,928

 

13,625

 

40,961

 

41,992

 

Total product and product related revenue

 

76,246

 

71,092

 

226,034

 

195,433

 

Royalties and other revenue

 

2,742

 

2,349

 

8,300

 

8,194

 

Revenue from Perlegen Sciences

 

879

 

2,744

 

3,920

 

8,005

 

Total revenue

 

79,867

 

76,185

 

238,254

 

211,632

 

 

 

 

 

 

 

 

 

 

 

Costs and expenses: