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UNITED STATES
SECURITIES AND EXCHANGE COMMISSION

Washington, D.C. 20549


FORM 10-Q


     
[X]   QUARTERLY REPORT PURSUANT TO SECTION 13 OR 15(d) OF THE
SECURITIES EXCHANGE ACT OF 1934

For the quarterly period ended September 30, 2004

or

     
[  ]   TRANSITION REPORT PURSUANT TO SECTION 13 OR 15(d) OF THE
SECURITIES EXCHANGE ACT OF 1934

For the transition period from                     to                    

Commission File Number: 000-26658

PHARMACYCLICS, INC.


(Exact name of registrant as specified in its charter)
     
Delaware   94-3148201

 
 
 
(State or other jurisdiction of incorporation or organization)   (IRS Employer Identification Number)

995 E. Arques Avenue
Sunnyvale, California 94085-4521


(Address of principal executive offices including zip code)

(408) 774-0330


(Registrant’s telephone number, including area code)

Indicate by check mark whether the registrant (1) has filed all reports required to be filed by Section 13 or 15 (d) of the Securities Exchange Act of 1934 during the preceding 12 months (or for such shorter period that the registrant was required to file reports), and (2) has been subject to such filing requirements for the past 90 days. YES [X] NO [  ].

Indicate by check mark whether the registrant is an accelerated filer (as defined in Rule 12b-2 of the Exchange Act). YES [X] NO [  ].

As of September 30, 2004, there were 19,650,856 shares of the registrant’s Common Stock, par value $0.0001 per share, outstanding.

This quarterly report on Form 10-Q consists of 25 pages of which this is page 1.



 


PHARMACYCLICS, INC.
Form 10-Q
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 EXHIBIT 31.1
 EXHIBIT 31.2
 EXHIBIT 32.1

PHARMACYCLICS®, (LOGO) (the pentadentate logo), Xcytrin® and Antrin® are registered U.S. trademarks of Pharmacyclics, Inc. Other trademarks, trade names or service marks used herein are the property of their respective owners.

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PART I - FINANCIAL INFORMATION

Item 1. Financial Statements

PHARMACYCLICS, INC.
(a development stage enterprise)

CONDENSED BALANCE SHEETS
(unaudited; in thousands)
                 
    September 30,   June 30,
    2004
  2004
ASSETS
               
Current assets:
               
Cash and cash equivalents
  $ 40,999     $ 42,432  
Marketable securities
    53,149       58,986  
Prepaid expenses and other current assets
    1,306       1,429  
 
   
 
     
 
 
Total current assets
    95,454       102,847  
Property and equipment, net
    1,143       1,293  
Other assets
    527       527  
 
   
 
     
 
 
 
  $ 97,124     $ 104,667  
 
   
 
     
 
 
LIABILITIES AND STOCKHOLDERS’ EQUITY
               
Current liabilities:
               
Accounts payable
  $ 2,818     $ 3,166  
Accrued liabilities
    1,083       1,128  
 
   
 
     
 
 
Total current liabilities
    3,901       4,294  
Deferred rent
    93       85  
 
   
 
     
 
 
Total liabilities
    3,994       4,379  
 
   
 
     
 
 
Stockholders’ equity:
               
Common stock
    2       2  
Additional paid-in capital
    316,284       316,266  
Accumulated other comprehensive loss
    (123 )     (250 )
Deficit accumulated during development stage
    (223,033 )     (215,730 )
 
   
 
     
 
 
Total stockholders’ equity
    93,130       100,288  
 
   
 
     
 
 
 
  $ 97,124     $ 104,667  
 
   
 
     
 
 

The accompanying notes are an integral part of these condensed financial statements.

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PHARMACYCLICS, INC.
(a development stage enterprise)

CONDENSED STATEMENTS OF OPERATIONS
(unaudited; in thousands, except per share data)
                         
                    Period From
                    Inception
    Three Months Ended   (April 1991)
    September 30,   through
   
  September 30,
    2004
  2003
  2004
Revenues:
                       
License and milestone revenues
  $     $     $ 7,855  
Contract revenues
                5,847  
 
   
 
     
 
     
 
 
Total revenues
                13,702  
 
   
 
     
 
     
 
 
Operating expenses:
                       
Research and development
    6,109       5,935       228,035  
Marketing, general and administrative
    1,628       1,544       43,210  
 
   
 
     
 
     
 
 
Total operating expenses
    7,737       7,479       271,245  
 
   
 
     
 
     
 
 
Loss from operations
    (7,737 )     (7,479 )     (257,543 )
Interest and other income, net
    434       278       34,510  
 
   
 
     
 
     
 
 
Net loss
  $ (7,303 )   $ (7,201 )   $ (223,033 )
 
   
 
     
 
     
 
 
Basic and diluted net loss per share
  $ (0.37 )   $ (0.44 )        
 
   
 
     
 
         
Shares used to compute basic and diluted net loss per share
    19,649       16,236          
 
   
 
     
 
         

The accompanying notes are an integral part of these condensed financial statements

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PHARMACYCLICS, INC.
(a development stage enterprise)

CONDENSED STATEMENTS OF CASH FLOWS
(unaudited; in thousands)
                         
                    Period From
        Inception
    Three Months Ended   (April 1991)
    September 30,   through
   
  September 30,
    2004
  2003
  2004
Cash flows from operating activities:
                       
Net loss
  $ (7,303 )   $ (7,201 )   $ (223,033 )
Adjustments to reconcile net loss to net cash used in operating activities:
                       
Depreciation and amortization
    207       438       13,114  
Stock compensation expense
    3       3       871  
Gain on sale of marketable securities
                58  
Write-down of fixed assets
                381  
Changes in assets and liabilities:
                       
Prepaid expenses and other assets
    123       110       (1,833 )
Accounts payable
    (348 )     489       2,818  
Accrued liabilities
    (45 )     206       1,083  
Deferred rent
    8       17       93  
 
   
 
     
 
     
 
 
Net cash used in operating activities
    (7,355 )     (5,938 )     (206,448 )
 
   
 
     
 
     
 
 
Cash flows from investing activities:
                       
Purchase of property and equipment
    (57 )     (52 )     (10,869 )
Proceeds from sale of property and equipment
                112  
Purchases of marketable securities
          (11,584 )     (442,516 )
Proceeds from maturities and sales of marketable securities
    5,964       12,364       389,186  
 
   
 
     
 
     
 
 
Net cash provided by (used in) investing activities
    5,907       728       (64,087 )
 
   
 
     
 
     
 
 
Cash flows from financing activities:
                       
Issuance of common stock, net of issuance costs
    15       37       291,901  
Proceeds from notes payable
                3,000  
Issuance of convertible preferred stock, net of issuance costs
                20,514  
Payments under capital lease obligations
                (3,881 )
 
   
 
     
 
     
 
 
Net cash provided by financing activities
    15       37       311,534  
 
   
 
     
 
     
 
 
Increase (decrease) in cash and cash equivalents
    (1,433 )     (5,173 )     40,999  
Cash and cash equivalents at beginning of period
    42,432       50,371        
 
   
 
     
 
     
 
 
Cash and cash equivalents at end of period
  $ 40,999     $ 45,198     $ 40,999  
 
   
 
     
 
     
 
 

The accompanying notes are an integral part of these condensed financial statements.

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PHARMACYCLICS, INC.
(a development stage enterprise)

NOTES TO CONDENSED FINANCIAL STATEMENTS

Note 1 - Summary of Significant Accounting Principles

Basis of Presentation

     The accompanying unaudited condensed financial statements of Pharmacyclics, Inc. (the “company” or “Pharmacyclics”) have been prepared in accordance with accounting principles generally accepted in the United States of America for interim financial information and with the instructions to Form 10-Q and Rule 10-01 of Regulation S-X. Accordingly, they do not contain all of the information and footnotes required for complete financial statements. In the opinion of management, the accompanying unaudited, condensed financial statements reflect all adjustments (consisting of normal, recurring adjustments) considered necessary for a fair presentation of the company’s interim financial information. These financial statements and notes should be read in conjunction with the audited financial statements of the company included in the company’s Annual Report on Form 10-K for the year ended June 30, 2004 filed with the Securities and Exchange Commission on August 30, 2004.

     The results of operations for the three months ended September 30, 2004 are not necessarily indicative of the operating results that may be reported for the fiscal year ending June 30, 2005 or for any other future period.

Employee Stock-Based Compensation

     The company accounts for stock-based employee compensation arrangements in accordance with the provisions of Accounting Principles Board Opinion No. 25, Accounting for Stock Issued to Employees (“APB 25”), Financial Accounting Standards Board Interpretation No. 44, Accounting for Certain Transactions Involving Stock Compensation – an Interpretation of APB No. 25 (“FIN 44”) and complies with the disclosure provisions of Statement of Financial Accounting Standard No. 123, Accounting for Stock-Based Compensation (“SFAS No. 123”) as amended by Statement of Financial Accounting Standards No. 148, Accounting for Stock-Based Compensation Disclosure (“SFAS No. 148”).

     Under APB 25, compensation expense is based on the difference, if any, on the date of the grant, between the fair value of the company’s stock and the exercise price. SFAS No. 123 defines a “fair value” based method of accounting for an employee stock option or similar equity instruments.

     The following table illustrates the effect on net loss per common share if the company had applied the fair value recognition provisions of SFAS No. 123 to stock-based employee compensation (in thousands, except per share amounts):

                 
    Three Months Ended
    September 30,
    2004
  2003
Net loss, as reported
  $ (7,303 )   $ (7,201 )
Employee stock-based compensation using the fair value based method
    (2,100 )     (1,953 )
 
   
 
     
 
 
Pro forma net loss
  $ (9,403 )   $ (9,154 )
 
   
 
     
 
 
Basic and diluted net loss per share, as reported
  $ (0.37 )   $ (0.44 )
 
   
 
     
 
 
Pro forma basic and diluted net loss per share
  $ (0.48 )   $ (0.56 )
 
   
 
     
 
 

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Note 2 - Basic and Diluted Net Loss Per Share

     Basic and diluted net loss per share is computed by dividing the net loss for the period by the weighted average number of shares of common stock outstanding during the period. The calculation of diluted net loss per share excludes potential common stock if their effect is antidilutive. Potential common shares consist of the incremental common shares issuable upon the exercise of stock options (using the treasury stock method). Options to purchase 4,241,088 and 3,932,004 shares of common stock were outstanding at September 30, 2004 and 2003, respectively, and were excluded from the calculation of loss per share as they were antidilutive.

Note 3 - Comprehensive Loss

     Comprehensive loss includes unrealized gains (losses) on marketable securities that are excluded from the results of operations.

     The company’s comprehensive losses were as follows (in thousands):

                 
    Three Months Ended
    September 30,
    2004
  2003
Net loss
  $ (7,303 )   $ (7,201 )
Change in net unrealized gains and losses on available-for-sale securities
    127       (37 )
 
   
 
     
 
 
Comprehensive loss
  $ (7,176 )   $ (7,238 )
 
   
 
     
 
 

Note 4 - Recent Accounting Pronouncements

     At its November 2003 meeting, the Emerging Issues Task Force (EITF) reached a consensus on disclosure guidance previously discussed under EITF 03-01, The Meaning of Other-Than-Temporary Impairment and Its Application to Certain Investments. At its March 2004 meeting, the EITF reached a consensus on recognition and measurement guidance previously discussed under EITF 03-01. The consensus clarifies the meaning of other-than-temporary impairment and its application to investments classified as either available-for-sale or held-to-maturity under FASB Statement No. 115, Accounting for Certain Investments in Debt and Equity Securities, and investments accounted for under the cost method or the equity method. The recognition and measurement guidance for which the consensus was reached in the March 2004 meeting is to be applied to other-than-temporary impairment evaluations in reporting periods beginning after June 15, 2004. We do not believe that this consensus on the recognition and measurement guidance will have an impact on our results of operations.

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Item 2. Management’s Discussion and Analysis of Financial Condition and Results of Operations

     You should read the following discussion and analysis of our financial condition and results of operations together with our interim financial statements and the related notes appearing at the beginning of this report. The interim financial statements and this Management’s Discussion and Analysis of Financial Condition and Results of Operations should be read in conjunction with the financial statements and notes thereto for the year ended June 30, 2004 and the related Management’s Discussion and Analysis of Financial Condition and Results of Operations, both of which are contained in our Annual Report on Form 10-K filed with the Securities and Exchange Commission on August 30, 2004.

     The following discussion contains forward-looking statements that involve risks and uncertainties. Our actual results could differ materially from any future performance suggested in this report as a result of factors, including those discussed in “Factors That May Affect Future Operating Results” and elsewhere in this report and in the company’s Annual Report on Form 10-K for the fiscal year ended June 30, 2004. All forward-looking statements are based on information currently available to Pharmacyclics; and we assume no obligation to update such forward-looking statements.

Overview

     Pharmacyclics is a pharmaceutical company focused on the development of products that improve existing therapeutic approaches to cancer and atherosclerosis. To date, substantially all of our resources have been dedicated to the research and development of our products, and we have not generated any commercial revenues from the sale of our products. We do not expect to generate any product revenues until we receive the necessary regulatory and marketing approvals and launch one of our products, if at all. We have two primary drug products, or research and development programs, for which we are currently focusing our efforts: Xcytrin® (motexafin gadolinium) Injection and Antrin® (motexafin lutetium) Phototherapy.

     Xcytrin, our lead product candidate, is an anti-cancer agent being evaluated in various clinical situations. We are enrolling patients in a pivotal randomized Phase 3 trial of Xcytrin for the potential treatment of lung cancer patients with brain metastases. This randomized controlled study, known as the SMART (Study of Neurologic Progression with Motexafin Gadolinium And Radiation Therapy) trial, is planned to enroll approximately 550 patients; and we now anticipate completion of enrollment in this trial in the first quarter of calendar 2005. The trial will compare the effects of whole brain radiation therapy (WBRT) alone to WBRT plus Xcytrin in lung cancer patients with brain metastases. The primary efficacy endpoint will be time to neurologic progression as determined by a blinded events review committee. Survival and neurocognitive function will also be assessed as secondary endpoints of the trial. We requested and received a Special Protocol Assessment from the FDA for the SMART trial. Special Protocol Assessment provides for sponsors of clinical trials to receive official FDA evaluation, guidance and agreement on pivotal trials that will form the basis for final approval.

     Our strategy is to evaluate Xcytrin for the treatment of a diverse range of cancer types and in various clinical situations including Xcytrin as a single agent and in combination with chemotherapy and/or radiation therapy. We have completed a multicenter Phase 2 trial with Xcytrin and radiation for the treatment of glioblastoma multiforme, a malignant primary brain tumor. We have also begun Phase 2 clinical trials with Xcytrin used alone in hematologic cancers such as lymphomas and chronic lymphocytic leukemia and a Phase 2 clinical trial with Xcytrin used alone for kidney cancer. Phase 1 trials are underway evaluating Xcytrin given in combination with Taxotere® for recurrent lung, prostate, ovarian and breast cancer, and with Taxotere and Cisplatin for newly diagnosed lung cancer. We also have an ongoing Phase 1 trial with Xcytrin combined with Temodar® for primary brain tumors and an ongoing Phase 1 trial with Xcytrin in combination with cisplatin, 5-fluorouracil and radiation for the treatment of advanced head and neck cancer.

     We also completed a Phase 1 clinical trial with Antrin Phototherapy for the treatment of coronary artery disease in patients receiving balloon angioplasty and stents. This study was primarily designed to evaluate the safety of various doses of drug and light. Results of this trial were published in the September 2003 issue of the journal Circulation. Seventy-nine patients were treated on this protocol, which demonstrated

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the safety and feasibility of Antrin Phototherapy and determined optimum doses of drug and light for future trials. No major treatment-related angiographic or biochemical adverse effects or abnormalities were observed and no dose-limiting toxicities were noted. No instances of emergency coronary artery bypass, death, stroke or myocardial infarction occurred in patients who received both Antrin infusion and endovascular illumination and activation of the drug. The most frequently reported side effects were mild, transient rash and reversible mild tingling in the hands and feet, some of which lasted days to weeks, but did not require clinical intervention.

     We have incurred significant operating losses since our inception in 1991, and as of September 30, 2004, had an accumulated deficit of approximately $223.0 million. The process of developing and commercializing our products requires significant research and development, preclinical testing and clinical trials, manufacturing arrangements as well as regulatory and marketing approvals. These activities, together with our general and administrative expenses, are expected to result in significant operating losses until the commercialization of our products generates sufficient revenues to cover our expenses. We expect that losses will fluctuate from quarter to quarter and that such fluctuations may be substantial. Our achieving profitability depends upon our ability, alone or with others, to successfully complete the development of our products under development, and obtain required regulatory clearances and successfully manufacture and market our products.

Results of Operations

Research and Development

     Research and Development Expenses. Research and development expenses were $6,109,000 and $5,935,000 for the three months ended September 30, 2004 and 2003, respectively. The $174,000 increase was primarily due to increased third party clinical trial costs ($336,000) and salary and related expenses ($196,000) to support the continued enrollment in its Phase 3 Smart trial and Phase 1 and 2 clinical trials opened in fiscal 2004. These increases were partially offset by reduced facility costs ($253,000).

     Research and development costs are identified as either directly attributed to one of our research and development programs or as an indirect cost, with only direct costs being tracked by specific program. Direct costs consist of personnel costs directly associated with a program, preclinical study costs, clinical trial costs, and related clinical drug and device development and manufacturing costs, drug formulation costs, contract services and other research expenditures. Indirect costs consist of personnel costs not directly associated with a program, overhead and facility costs and other support service expenses. Prior to 1999, we did not track our historical research and development costs by specific program and for this reason we cannot accurately estimate our total historical costs on a specific program basis. Direct costs by program and indirect costs are as follows:

                             
                Related R&D Expenses
                Three Months ended
            Estimated   September 30,
        Phase of   Completion  
Product
  Description
  Development
  of Phase
  2004
  2003
XCYTRIN
  Cancer   Several Phase 1 trials   Unknown   $ 3,900,000     $ 3,065,000  
 
      Several Phase 2 trials   Unknown                
 
      Phase 3   Fiscal 2006                
ANTRIN
  Coronary artery disease   Phase 1   Completed     95,000       243,000  
OTHER
                      30,000  
 
               
 
     
 
 
 
  Total direct costs             3,995,000       3,338,000  
 
  Indirect costs             2,114,000       2,597,000  
 
               
 
     
 
 
 
  Total research and development costs           $ 6,109,000     $ 5,935,000  
 
               
 
     
 
 

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     Research and development expenses increased $174,000, or 3%, for the three months ended September 30, 2004 compared to the three months ended September 30, 2003, and were comprised of the following:

  Xcytrin program costs increased $835,000, or 27%, primarily due to:

o   an increase in third party clinical trial costs of $357,000 as the company continued to increase enrollment in its Phase 3 SMART trial and several other Phase 1 and Phase 2 trials; and
 
o   an increase in employee costs of $313,000 as the company continues to allocate more employee resources to support the clinical trials.

  Indirect costs decreased $481,000, or 19% primarily due to a decrease in facility costs ($253,000) due to a decrease in building space leased and a decrease in depreciation.

     We expect slightly increasing research and development costs for the remainder of fiscal 2005 primarily due to higher costs from our Phase 3 SMART trial and due to additional Phase 1 and Phase 2 trials for our Xcytrin product.

Marketing, General and Administrative

     Marketing, General and Administrative Expenses. Marketing, general and administrative expenses were $1,628,000 and $1,544,000 for the three months ended September 30, 2004 and 2003, respectively. The increase was primarily due to an increase in consulting expenses ($109,000) related to product commercialization activities. We expect future general and administrative spending to remain relatively consistent with current levels.

     Interest and Other, Net. Interest and other, net, was $434,000 and $278,000 for the three months ended September 30, 2004 and 2003, respectively. The increase was primarily due to higher balances of cash, cash equivalents and marketable securities from our public stock offering in April 2004 and higher interest rates. Our cash equivalents and marketable securities consist primarily of fixed rate instruments.

Liquidity and Capital Resources

     Our principal sources of working capital have been private and public equity financings and proceeds from collaborative research and development agreements, as well as interest income.

     As of September 30, 2004, we had approximately $94,148,000 in cash, cash equivalents and marketable securities. Net cash used in operating activities of $7,355,000 during the three months ended September 30, 2004, resulted primarily from our net loss and a decrease in accounts payable, partially offset by depreciation and amortization. Net cash used in operating activities of $5,938,000 during the three months ended September 30, 2003, resulted primarily from our net loss, net of depreciation and amortization, partially offset by an increase in accounts payable.

     Net cash provided by investing activities of $5,907,000 in the three months ended September 30, 2004, consisted primarily of sales and maturities of marketable securities. Net cash provided by investing activities of $728,000 for the three months ended September 30, 2003, consisted primarily of proceeds from maturities and sales of marketable securities, net of purchases of marketable securities.

     Net cash provided by financing activities of $15,000 and $37,000 in the three months ended September 30, 2004 and 2003, respectively, consisted primarily of proceeds from the exercise of stock options.

     In February 2004, the company filed a registration statement on Form S-3 to offer and sell, from time to time, equity, debt securities and warrants in one or more offerings up to a total dollar amount of $100 million. In April 2004, the company sold 3,200,000 shares of common stock at a price of $13.00 per share in an underwritten public offering pursuant to this registration statement. The company received

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approximately $39,350,000 in net proceeds from the issuance of the 3,200,000 shares. We may seek to raise funds through additional public offerings in the future but cannot guarantee that such efforts will be successful.

     We lease our facility under a non-cancelable operating lease that expires in fiscal 2008. Future minimum lease payments under this non-cancelable operating lease as of September 30, 2004 are as follows:

         
    Operating
    Lease
    Commitments
Remaining 9 months of fiscal 2005
  $ 876,000  
Fiscal 2006
    1,201,000  
Fiscal 2007
    1,220,000  
Fiscal 2008
    610,000  
 
   
 
 
Total future minimum lease payments
  $ 3,907,000  
 
   
 
 

     Based upon the current status of our product development and commercialization plans, we believe that our existing cash, cash equivalents and marketable securities, will be adequate to satisfy our capital needs through at least fiscal year 2006. We now anticipate completion of enrollment of our Phase 3 clinical trial of our first investigational drug, Xcytrin, in patients with brain metastases from non-small cell lung cancer, in the first calendar quarter of 2005 (the third fiscal quarter of our fiscal 2005). There can be no assurance that our current capital resources will be sufficient to satisfy our capital needs through full enrollment of the Xcytrin trial or, if Xcytrin is ultimately approved for sale, through its production, marketing and commercialization. If our existing capital resources are insufficient to satisfy our capital requirements through testing, regulatory clearance and commercialization of Xcytrin, we would be required to raise additional funds through public or private financings, collaborative relationships (partnerships with other drug manufacturers) or other arrangements to complete commercialization. Our actual capital requirements will depend on many factors, including the status of product development; the time and cost involved in conducting clinical trials and obtaining regulatory approvals; filing, prosecuting and enforcing patent claims; competing technological and market developments; and our ability to market and distribute our products and establish new collaborative and licensing arrangements.

     Our forecast of the period of time through which our financial resources will be adequate to support our operations is a forward-looking statement that involves risks and uncertainties, and actual results could vary materially. The factors described above will impact our future capital requirements and the adequacy of our available funds. We may be required to raise additional funds through public or private financings, collaborative relationships or other arrangements. We cannot be certain that such additional funding, if needed, will be available on terms attractive to us, or at all. Furthermore, any additional equity financing may be dilutive to existing stockholders and debt financing, if available, may involve restrictions on our business. Collaborative arrangements, if necessary to raise additional funds, may require us to relinquish rights to certain of our technologies, products or marketing territories. Our failure to raise capital when needed could have a material adverse effect on our business, financial condition and results of operations.

Critical Accounting Policies and the Use of Estimates

     We believe the following critical accounting policies presently involve our more significant judgments, assumptions and estimates used in the preparation of our financial statements and accompanying notes.

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     Revenue Recognition

     Revenues are recognized when persuasive evidence of an arrangement exists, title has transferred or services have been rendered, the price is fixed and determinable and collectibility is reasonably assured. License and milestone fees are recognized as revenue when earned over the period of the arrangement, as evidenced by achievement of the specified milestones and the absence of any on-going obligation. License, milestone, contract and grant revenues are not subject to repayment. Any amounts received in advance of performance are recorded as deferred revenue.

     Cash Equivalents and Marketable Securities

     We maintain investment portfolio holdings of various issuers, types and maturities. We consider all highly liquid investments purchased with original maturities of three months or less to be cash equivalents. At September 30, 2004, these investment securities are classified as available-for-sale and consequently are recorded on the balance sheet at fair value with unrealized gains and losses reported as a component of accumulated other comprehensive income (loss) within stockholders’ equity. Management assesses whether declines in the fair value of investment securities are other than temporary. If the decline in fair value is judged to be other than temporary, the cost basis of the individual security is written down to fair value and the amount of the write down is included in earnings. In determining whether a decline is other than temporary, management considers the following factors:

  Length of the time and the extent to which the market value has been less than cost;
 
  The financial condition and near-term prospects of the issuer;
 
  Our intent and ability to retain its investment in the issuer for a period of time sufficient to allow for any anticipated recovery in market value.

     To date we have had no declines in fair value that have been identified as other than temporary.

     Research and Development Expenses and Accruals

     Research and development expenses include personnel and facility-related expenses, outside contracted services including clinical trial costs, manufacturing and process development costs, research costs and other consulting services. Research and development costs are expensed as incurred. In instances where we enter into agreements with third parties for clinical trials, manufacturing and process development, research and other consulting activities, costs are expensed upon the earlier of when non-refundable amounts are due or as services are performed. Amounts due under such arrangements may be either fixed fee or fee for service, and may include upfront payments, monthly payments, and payments upon the completion of milestones or receipt of deliverables.

     Our cost accruals for clinical trials are based on estimates of the services received and efforts expended pursuant to contracts with numerous clinical trial centers and clinical research organizations. In the normal course of business we contract with third parties to perform various clinical trial activities in the on-going development of potential products. The financial terms of these agreements are subject to negotiation and vary from contract to contract and may result in uneven payment flows. Payments under the contracts depend on factors such as the achievement of certain events, the successful accrual of patients, the completion of portions of the clinical trial or similar conditions. The objective of our accrual policy is to match the recording of expenses in our financial statements to the actual services received and efforts expended. As such, expense accruals related to clinical trials are recognized based on our estimate of the degree of completion of the event or events specified in the specific clinical study or trial contract.

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Factors That May Affect Future Operating Results

Risks Related to Pharmacyclics

     We operate in an environment that involves a number of risks and uncertainties. The risks and uncertainties described below are not the only risks and uncertainties we face. Additional risks and uncertainties not presently known to us or that we currently deem immaterial also may impair our business operations. If any of the following risks actually occur, our business, results of operations and financial condition would suffer. The risks discussed below also include forward-looking statements, and our actual results may differ substantially from those discussed in these forward-looking statements. You should carefully consider the risks described below, together with all of the other information in this report and our Annual Report on Form 10-K for the year ended June 30, 2004, before making a decision to invest in our common stock. All forward-looking statements are based on information currently available to Pharmacyclics and we assume no obligation to update any such forward-looking statements.

    All of our product candidates are in development, and we cannot be certain that any of our products under development will be commercialized.

     To be profitable, we must successfully research, develop, obtain regulatory approval for, manufacture, introduce, market and distribute our products under development. The time frame necessary to achieve these goals for any individual product is long and uncertain. Before we can sell any of our products under development, we must demonstrate through preclinical (animal) studies and clinical (human) trials that each product is safe and effective for human use for each targeted disease. We have conducted and plan to continue to conduct extensive and costly clinical trials to assess the safety and effectiveness of our potential products. We cannot be certain that we will be permitted to begin or continue our planned clinical trials for our potential products, or if permitted, that our potential products will prove to be safe and produce their intended effects.

     The completion rate of our clinical trials depends upon, among other factors, the rate of patient enrollment. Many factors affect patient enrollment, including the size of the patient population, the proximity of patients to clinical sites, the eligibility criteria for the trial, competing clinical trials and new drugs or procedures used for the conditions we are investigating. Other companies are conducting clinical trials and have announced plans for future trials that are seeking or are likely to seek patients with the same diseases that we are studying. We may fail to obtain adequate levels of patient enrollment in our clinical trials. Delays in planned patient enrollment may result in increased costs, delays or termination of clinical trials, which could have a material adverse effect on us.

     Additionally, demands on our clinical staff have been increasing and we expect they will continue to increase due to our monitoring of additional clinical trials. We may fail to effectively oversee and monitor these many simultaneous clinical trials, which would result in increased costs or delays of our clinical trials. Even if these clinical trials are completed, we may fail to complete and submit a new drug application for many reasons, including, as was the case with our first Phase 3 trial of Xcytrin, failure to meet our primary endpoints. Even if we are able to submit a new drug application, the U.S. Food and Drug Administration, or FDA, may refuse to file our application or may not approve our application in a timely manner or at all.

     Data already obtained from preclinical studies and clinical trials of our products under development do not necessarily predict the results that will be obtained from later preclinical studies and clinical trials. Moreover, data from clinical trials we are conducting is susceptible to varying interpretations that could delay, limit or prevent regulatory approval. A number of companies in the pharmaceutical industry have suffered significant setbacks in advanced clinical trials, even after promising results in earlier trials. The failure to adequately demonstrate the safety and effectiveness of a product under development could delay or prevent regulatory clearance of the potential product and would materially harm our business. Our clinical trials may not demonstrate the sufficient levels of safety and efficacy necessary to obtain the requisite regulatory approval or may not result in marketable products. In this regard, our initial Phase 3

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trial of Xcytrin failed to meet its co-primary endpoints even though our Phase 1b/2 trial showed a benefit for treated patients. The outcome of the current Phase 3 trial may delay or prevent the regulatory clearance of Xcytrin as a treatment for brain metastases in patients with lung cancer and may result in material harm to our business. The outcomes of our other ongoing Phase 1 and Phase 2 trials with Xcytrin for additional cancer indications may not provide sufficient data supporting advancement of the development of Xcytrin for these additional cancer indications and also may result in material harm to our business.

    We have a history of operating losses and we expect to continue to have losses in the future.

     We have incurred significant operating losses since our inception in 1991 and, as of September 30, 2004, had an accumulated deficit of approximately $223.0 million. We expect to continue to incur substantial additional operating losses until such time, if ever, as the commercialization of our products generates sufficient revenues to cover our expenses. Our achieving profitability depends upon our ability, alone or with others, to successfully complete the development of our products, and to obtain required regulatory clearances and to successfully manufacture and market our proposed products. Our lead product, Xcytrin, may receive regulatory clearance on a delayed basis or may not receive such clearance at all, which would have a material impact on our ability to become profitable. To date, we have not generated revenue from the commercial sale of our products.

    Failure to obtain product approvals or comply with ongoing governmental regulations could adversely affect our business.

     The manufacture and marketing of our products and our research and development activities are subject to extensive regulation for safety, efficacy and quality by numerous government authorities in the United States and abroad. Before receiving FDA clearance to market a product, we will have to demonstrate that the product is safe and effective on the patient population and for the diseases that will be treated. Clinical trials, and the manufacturing and marketing of products, are subject to the rigorous testing and approval process of the FDA and equivalent foreign regulatory authorities. The Federal Food, Drug and Cosmetic Act and other federal, state and foreign statutes and regulations govern and influence the testing, manufacture, labeling, advertising, distribution and promotion of drugs and medical devices. As a result, clinical trials and regulatory approval can take a number of years to accomplish and require the expenditure of substantial resources.

     Data obtained from clinical trials are susceptible to varying interpretations that could delay, limit or prevent regulatory clearances. Data from our completed initial Phase 3 clinical trial of Xcytrin were not sufficient to obtain regulatory clearance. Any approval of Xcytrin will require at least one additional clinical trial, including the Phase 3 trial we are currently conducting. Conducting additional trials will cause significant delays in approval and consume additional resources and may not be sufficient to obtain regulatory clearance.

     In addition, we may encounter delays or rejections based upon additional government regulation from future legislation or administrative action or changes in FDA policy during the period of product development, clinical trials and FDA regulatory review. The Fast-Track designation that we have received for our Phase 3 trial of Xcytrin may not actually lead to a faster development, regulatory review, or approval process. We may encounter similar delays in foreign countries. We may be unable to obtain requisite approvals from the FDA and foreign regulatory authorities and even if obtained, such approvals may not be received on a timely basis, or they may not cover the clinical uses that we specify.

     Furthermore, regulatory clearance may entail ongoing requirements for post-marketing studies. The manufacture and marketing of drugs are subject to continuing FDA and foreign regulatory review and later discovery of previously unknown problems with a product, manufacturer or facility may result in restrictions, including withdrawal of the product from the market. Any of the following events, if they were to occur, could delay or preclude us from further developing, marketing or realizing full commercial use of our products, which in turn would have a material adverse effect on our business, financial condition and results of operations:

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  failure to obtain and thereafter maintain requisite governmental approvals;
 
  failure to obtain approvals for specific indications of our products under development; or
 
  identification of serious and unanticipated adverse side effects in our products under development.

     Manufacturers of drugs also must comply with the applicable FDA Good Manufacturing Practice regulations, which include quality control and quality assurance requirements as well as the corresponding maintenance of records and documentation. Manufacturing facilities are subject to ongoing periodic inspection by the FDA and corresponding state agencies, including unannounced inspections, and must be licensed before they can be used in commercial manufacturing of our products. We or our present or future suppliers may be unable to comply with the applicable cGMP regulations and other FDA regulatory requirements. Failure of our suppliers to follow current Good Manufacturing Practice or other regulatory requirements may lead to significant delays in the availability of products for commercial or clinical use and could subject us to fines, injunctions and civil penalties. We also may be subject to delays in commercializing our products for Antrin Phototherapy due to delays in approvals of the third-party light sources required for this product.

     Acceptance of our products in the marketplace is uncertain, and failure to achieve market acceptance will harm our business.

     Even if approved for marketing, our products may not achieve market acceptance. The degree of market acceptance will depend upon a number of factors, including:

  the receipt of regulatory approvals for the indications that we are studying;
 
  the establishment and demonstration in the medical community of the safety, clinical efficacy and cost-effectiveness of our products and their potential advantages over existing therapeutic products;
 
  marketing and distribution support;
 
  the introduction, market penetration and pricing strategies of competing and future products; and
 
  pricing and reimbursement policies of government and third-party payors such as insurance companies, health maintenance organizations and other plan administrators.

     Physicians, patients, payors or the medical community in general may be unwilling to accept, purchase, utilize or recommend any of our products.

We may fail to adequately protect or enforce our intellectual property rights or secure rights to third-party patents.

     We face risks and uncertainties related to our intellectual property rights. For example:

  we may be unable to obtain or maintain patent or other intellectual property protection for any products or processes that we may develop;
 
  third parties may obtain patents covering the manufacture, use or sale of these products, which may prevent us from commercializing any of our products under development globally or in certain regions; and
 
  any future patents that we may obtain may not prevent other companies from competing with us by designing their products or conducting their activities so as to avoid the coverage of our patents.

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     A number of third-party patent applications have been published, and some have issued, relating to expanded porphyrin chemistries. It is likely that competitors and other third parties have and will continue to file applications for and receive patents relating to similar or even the same compositions, methods or designs as those of our products. If any third-party patent claims are asserted against our products and are upheld as valid and infringed by our products, we could be prevented from practicing the subject matter claimed in such patents and therefore from developing or commercializing our products, require license(s) or have to redesign our products or processes to avoid infringement. Such licenses may not be available or, if available, may not be on terms acceptable to us. Alternatively, we may be unsuccessful in any attempt to redesign our products or processes to avoid infringement. Litigation or other legal proceedings may be necessary to defend against claims of infringement, to enforce our patents, or to protect our trade secrets, and could result in substantial cost to the company and diversion of our efforts.

     We are aware of several U.S. patents owned or licensed by Schering AG that relate to pharmaceutical formulations and methods for enhancing magnetic resonance imaging. Even though we have obtained the opinion of outside patent counsel that our cancer treatment compounds do not infringe any valid, unexpired claims of such patents, Schering AG may still choose to assert one or more of those patents. If any of our products were legally determined to be infringing a valid and enforceable claim of any of Schering AG’s patents, our business could be materially adversely affected. Further, any allegation by Schering AG that we infringed their patents would likely result in significant legal costs and require the diversion of substantial management resources. We are aware that Schering AG has asserted patent rights against at least one other company in the contrast agent imaging market and that a number of companies have entered into licensing arrangements with Schering AG with respect to one or more of such patents. We cannot be certain that we would be successful in defending a lawsuit or able to obtain a license on commercially reasonable terms from Schering AG, if required.

     We also rely upon trade secrets, technical know-how and continuing technological innovation to develop and maintain our competitive position. Although we take steps to protect our proprietary rights and information, including the use of confidentiality and other agreements with our employees and consultants, and in our academic and commercial relationships, these steps may be inadequate, these agreements may be violated, or there may be no adequate remedy available for a violation. Furthermore, our competitors may independently develop substantially equivalent proprietary information and techniques, reverse engineer our information and techniques, or otherwise gain access to our proprietary technology. We may be unable to meaningfully protect our rights in unpatented proprietary technology.